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View Structure Prediction Details

Protein: TMN9_ARATH
Organism: Arabidopsis thaliana
Length: 644 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TMN9_ARATH.

Description E-value Query
Range
Subject
Range
TMN7_ARATH - Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana GN=TMN7 PE=2 SV=1
892.0 [0..27] [644..27]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFYRSSRRL QILGSVILLL SIHVAHSFYL PGVAPQDFEK GDELKVKVNK LTSIKTQLPY  60
   61 SYYSLPFCRP KKIVDSTENL GEVLRGDRIE NAPYSFKMR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [100-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EAQMCNVLGR VMLDAKSAKA FKEKIDDEYR VNMILDNLPL VVPIERIDPG QGSPSVVYQL  60
   61 GYHVGLKGQY EGSKEQKYFM HNHLAFTVRY HRDMQTDAAR IVGFEVKPYS VKHEYEGQWS 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [220-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKTRLTTCDP HTKRLVVSSA TPQEVENKKE IIFTYDVDFQ ESEVKWASRW DAYLLMSDNQ  60
   61 IHWFSIVNSL MIVLFLSGMV AMIMLRTLYR DISRY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [315-527]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NELETQEEAQ EETGWKLVHG DVFRPPANSD LLCVYVGTGV QCLGMVLVTM IFAMLGFLSP  60
   61 SNRGGLMTAM LLLWVFMGLF AGYASSRLYK MFKGTEWKRI AFRTAFLFPA VVSAIFFVLN 120
  121 ALIWGQKSSG AVPFGTMFAL IFLWFGISVP LVFVGAYLGF KKPPLDDPVK TNKIPRQIPE 180
  181 QAWYMNPIFS ILIGGILPFG AVFIELFFIL TSI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [528-644]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WLNQFYYIFG FLFLVFVILM VTCAEITIVL CYFQLCSEDY LWWWRSYLTS GSSAVYLFLY  60
   61 AAFYFFTKLQ ITKLVSAMLY FGYMLIASYA FFVLTGTIGF YACLWFTRLI YSSVKID

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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