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View Structure Prediction Details

Protein: EBF2_ARATH
Organism: Arabidopsis thaliana
Length: 623 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EBF2_ARATH.

Description E-value Query
Range
Subject
Range
gi|113547417, gi... - gi|115450691|ref|NP_001048946.1| Os03g0145000 [Oryza sativa (japonica cultivar-group)], gi|113547417...
266.0 [0..6] [614..40]

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Predicted Domain #1
Region A:
Residues: [1-623]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGIFRFSGD EDCLLGGSMY LSPGSCPGVY YPARKRLRVA ATSFYSGFEE KQTSIDVLPE  60
   61 ECLFEILRRL PSGQERSACA CVSKHWLNLL SSISRSEVNE SSVQDVEEGE GFLSRSLEGK 120
  121 KATDLRLAAI AVGTSSRGGL GKLQIRGSGF ESKVTDVGLG AVAHGCPSLR IVSLWNLPAV 180
  181 SDLGLSEIAR SCPMIEKLDL SRCPGITDSG LVAIAENCVN LSDLTIDSCS GVGNEGLRAI 240
  241 ARRCVNLRSI SIRSCPRIGD QGVAFLLAQA GSYLTKVKLQ MLNVSGLSLA VIGHYGAAVT 300
  301 DLVLHGLQGV NEKGFWVMGN AKGLKKLKSL SVMSCRGMTD VGLEAVGNGC PDLKHVSLNK 360
  361 CLLVSGKGLV ALAKSALSLE SLKLEECHRI NQFGLMGFLM NCGSKLKAFS LANCLGISDF 420
  421 NSESSLPSPS CSSLRSLSIR CCPGFGDASL AFLGKFCHQL QDVELCGLNG VTDAGVRELL 480
  481 QSNNVGLVKV NLSECINVSD NTVSAISVCH GRTLESLNLD GCKNITNASL VAVAKNCYSV 540
  541 NDLDISNTLV SDHGIKALAS SPNHLNLQVL SIGGCSSITD KSKACIQKLG RTLLGLNIQR 600
  601 CGRISSSTVD TLLENLWRCD ILY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.522879
Match: 2p1mB
Description: No description for 2p1mB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle