YRC Public Data Repository - Protein Structure Prediction

Protein:	DAD2_YARLI
Organism:	Yarrowia lipolytica CLIB122
Length:	114 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAD2_YARLI.

Description	E-value	Query Range	Subject Range
gi\|114188929, gi... - gi\|115402013\|ref\|XP_001217083.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	137.0	[0..3]	[113..21]
gi\|38108535, gi\|... - gi\|39968859\|ref\|XP_365820.1\| hypothetical protein MGG_02522 [Magnaporthe grisea 70-15], gb\|EAA54537....	132.0	[0..1]	[109..12]
DAD2_DEBHA - DASH complex subunit DAD2 - Debaryomyces hansenii (Yeast) (Torulaspora hansenii) gi\|49653621, gi\|... - gi\|50418869\|ref\|XP_457955.1\| hypothetical protein DEHA0C06897g [Debaryomyces hansenii CBS767], gi\|49...	130.0	[0..17]	[111..9]
gi\|85080891 - gi\|85080891\|ref\|XP_956625.1\| hypothetical protein NCU01841 [Neurospora crassa OR74A] gi\|28881231, gi\|... - gi\|32415603\|ref\|XP_328280.1\| predicted protein [Neurospora crassa], gi\|28917696\|gb\|EAA27389.1\| conse...	127.0	[0..17]	[109..20]
gi\|42545662, gi\|... - gi\|46109336\|ref\|XP_381726.1\| hypothetical protein FG01550.1 [Gibberella zeae PH-1], gi\|42545662\|gb\|E...	122.0	[0..20]	[109..28]
gi\|169604594, gi... - gi\|169604594\|ref\|XP_001795718.1\| hypothetical protein SNOG_05311 [Phaeosphaeria nodorum SN15], gi\|11...	119.0	[0..20]	[109..27]
gi\|40745998, gi\|... - gi\|67521882\|ref\|XP_659002.1\| hypothetical protein AN1398.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	119.0	[0..17]	[101..32]
DAD2_CANAL - DASH complex subunit DAD2 OS=Candida albicans GN=DAD2 PE=3 SV=1 DAD2_CANAL - DASH complex subunit DAD2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DAD2 PE=3 SV=1	117.0	[0..13]	[108..1]
gi\|90302101, gi\|... - gi\|90302101\|gb\|EAS31732.1\| hypothetical protein CIMG_07211 [Coccidioides immitis RS], gi\|119184935\|r...	117.0	[0..20]	[109..36]
DAD2_ASHGO - DASH complex subunit DAD2 OS=Ashbya gossypii GN=DAD2 PE=3 SV=1 DAD2_ASHGO - DASH complex subunit DAD2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-10...	116.0	[0..26]	[114..9]

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Predicted Domain #1

Region A:
Residues: [1-114]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRPRVSLAP NRLNHAGSEL DEKIAAKKRE LQQLVQLRQY SSDLADELEG LVQHVSCLAE  60
   61 ETDVVAEVMG NWAAVIRAIN LASTALARYT EEDYREPVLP EQLIRVPLED EQEE

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	46.886057
Match:	PF08654.1
Description:	No description for PF08654.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.855	0.004	microtubule	f.17.1	F1F0 ATP synthase subunit C

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.0148715042037492	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: