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View Structure Prediction Details

Protein: PGL1B_ARATH
Organism: Arabidopsis thaliana
Length: 313 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PGL1B_ARATH.

Description E-value Query
Range
Subject
Range
PGL1A_ARATH - PGR5-like protein 1A, chloroplastic OS=Arabidopsis thaliana GN=PGRL1A PE=1 SV=1
535.0 [0..1] [313..5]
gi|51965034, gi|... - gi|51979699|ref|XP_507596.1| PREDICTED OJ1191_A10.128 gene product [Oryza sativa (japonica cultivar-...
532.0 [0..1] [313..1]
gi|222629941, gi... - gi|50949061|ref|XP_493888.1| unknown protein [Oryza sativa], gi|222629941|gb|EEE62073.1| hypothetica...
gi|218195959 - gi|218195959|gb|EEC78386.1| hypothetical protein OsI_18164 [Oryza sativa Indica Group]
gi|14719338 - gi|14719338|gb|AAK73156.1|AC079022_29 unknown protein [Oryza sativa]
275.0 [0..118] [301..31]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFTLTIPRF SAISRKPITC SSSRTQCPAP FTHGRSISLR RRLTLLPLKA STDQSGQVGG  60
   61 EEVDSKILPY CSINKNEKRT IGEMEQEFLQ AMQSFYYEGK AIMSNEEFDN LKEELMWEG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [120-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSVVMLSSDE QRFLEASMAY VSGNPILSDE EYDKLKMKLK MDGSEIVCEG PRCSLRSKKV  60
   61 YSDLAIDYFK MFLLNVPATV VALGLFFFLD DITGFEITYL LELPEPFSFI FTWFAAVPAI 120
  121 VYLALSLTKL ILKDFLILKG PCPNCGTENV SFFGTILSIP NDSNTNNVKC SGCGTEMVYD 180
  181 SGSRLITLPE GGKA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle