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View Structure Prediction Details

Protein: BAP1_ARATH
Organism: Arabidopsis thaliana
Length: 192 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BAP1_ARATH.

Description E-value Query
Range
Subject
Range
gi|29378331 - gi|29378331|gb|AAO83847.1|AF484090_1 synaptotagmin I [Lymnaea stagnalis]
164.0 [0..2] [161..142]

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Predicted Domain #1
Region A:
Residues: [1-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYFGRSIDN HYTTMMTKTL EIDLRSAEGL KLNRRPIKKK TFAVVKIDEK CRKSNLDESR  60
   61 RSNPTWNYKS EMPINGNEQF IFIEVFYRTG SGHDKKIGEA KIPTNDFMGR YSPEGHLNFL 120
  121 SYRLRDEFGD KCGIVNLSIL VKSDPTRDYG ACSSQAAVTG LWRPRLETAS IDGYGGRTVT 180
  181 GVPVWGLYQR QF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.0
Match: 1dqvA
Description: Synaptogamin I
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle