YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|229500449, gi...
Organism:	Geobacillus sp. Y412MC52
Length:	60 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|229500449, gi....

Description	E-value	Query Range	Subject Range
gi\|89097489, gi\|... - gi\|89097489\|ref\|ZP_01170378.1\| Small acid soluble spore protein [Bacillus sp. NRRL B-14911], gi\|8908...	97.0	[0..1]	[58..52]
SSPH_BACLD - Small, acid-soluble spore protein H OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505...	89.0	[0..1]	[59..1]
SSPH_BACHD - Small, acid-soluble spore protein H OS=Bacillus halodurans GN=sspH PE=2 SV=1 SSPH_BACHD - Small, acid-soluble spore protein H OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7...	87.0	[0..1]	[59..2]
SSPH_BACSU - Small, acid-soluble spore protein H OS=Bacillus subtilis (strain 168) GN=sspH PE=1 SV=1 SSPH_BACSU - Small, acid-soluble spore protein H OS=Bacillus subtilis GN=sspH PE=1 SV=1 gi\|221312971 - gi\|221312971\|ref\|ZP_03594776.1\| acid-soluble spore protein H [Bacillus subtilis subsp. subtilis str.... gi\|221317897 - gi\|221317897\|ref\|ZP_03599191.1\| acid-soluble spore protein H [Bacillus subtilis subsp. subtilis str.... gi\|221322170 - gi\|221322170\|ref\|ZP_03603464.1\| acid-soluble spore protein H [Bacillus subtilis subsp. subtilis str....	87.0	[0..1]	[58..1]
gi\|47568057, gi\|... - gi\|47568057\|ref\|ZP_00238762.1\| small acid-soluble spore protein-related protein [Bacillus cereus G92...	86.0	[0..1]	[58..24]
SSPH1_BACCN - Small, acid-soluble spore protein H 1 OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-9...	84.0	[0..1]	[58..1]
gi\|228600566, gi... - gi\|229182942\|ref\|ZP_04310175.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus BGSC 6E1], gi... gi\|49480198, gi\|... - gi\|49480198\|ref\|YP_034870.1\| acid-soluble spore protein H [Bacillus thuringiensis serovar konkukian ... gi\|228693704, gi... - gi\|229089674\|ref\|ZP_04220936.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus Rock3-42], gi... gi\|42779759, gi\|... - gi\|42779759\|ref\|NP_977006.1\| acid-soluble spore protein H [Bacillus cereus ATCC 10987], gi\|42735676\|... gi\|228815267, gi... - gi\|228944365\|ref\|ZP_04106738.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis serova... gi\|228846352, gi... - gi\|228913301\|ref\|ZP_04076935.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis serova... gi\|222094364, gi... - gi\|222094364\|ref\|YP_002528423.1\| small, acid-soluble spore protein [Bacillus cereus Q1], gi\|22123842...	84.0	[0..1]	[58..24]
gi\|52144700, gi\|... - gi\|52144700\|ref\|YP_082129.1\| acid-soluble spore protein H [Bacillus cereus E33L], gi\|51978169\|gb\|AAU...	84.0	[0..1]	[58..24]
gi\|229188820, gi... - gi\|229188820\|ref\|ZP_04315854.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus ATCC 10876], ... gi\|229148952, gi... - gi\|229148952\|ref\|ZP_04277197.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus m1550], gi\|22... gi\|228606321, gi... - gi\|229177140\|ref\|ZP_04304529.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus 172560W], gi\|... gi\|228860330, gi... - gi\|228899299\|ref\|ZP_04063562.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis IBL 42... gi\|228951106, gi... - gi\|228951106\|ref\|ZP_04113222.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis serova... gi\|218540983, gi... - gi\|218895669\|ref\|YP_002444080.1\| small acid-soluble spore protein, H-type [Bacillus cereus G9842], g... gi\|228957031, gi... - gi\|228957031\|ref\|ZP_04118806.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis serova... gi\|228919469, gi... - gi\|228919469\|ref\|ZP_04082833.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis serova... gi\|228821815, gi... - gi\|228937851\|ref\|ZP_04100480.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis serova... gi\|228782446, gi... - gi\|228977307\|ref\|ZP_04137703.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis Bt407]... gi\|229042472, gi... - gi\|229042472\|ref\|ZP_04190217.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus AH676], gi\|22... gi\|218231242, gi... - gi\|218231242\|ref\|YP_002365410.1\| small acid-soluble spore protein, H-type [Bacillus cereus B4264], g... gi\|228963707, gi... - gi\|228963707\|ref\|ZP_04124849.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis serova... gi\|206737522, gi... - gi\|206968602\|ref\|ZP_03229558.1\| small acid-soluble spore protein, H-type [Bacillus cereus AH1134], g... gi\|228970732, gi... - gi\|228970732\|ref\|ZP_04131373.1\| Small, acid-soluble spore protein H 1 [Bacillus thuringiensis serova... SSPH1_BACCR - Small, acid-soluble spore protein H 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NB... gi\|228657367, gi... - gi\|229126045\|ref\|ZP_04255067.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus BDRD-Cer4], g... gi\|229143338, gi... - gi\|229143338\|ref\|ZP_04271769.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus BDRD-ST24], g... gi\|228714760, gi... - gi\|229068299\|ref\|ZP_04201602.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus F65185], gi\|2... gi\|229108220, gi... - gi\|229108220\|ref\|ZP_04237842.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus Rock1-15], gi...	84.0	[0..1]	[58..1]
gi\|229194924, gi... - gi\|229194924\|ref\|ZP_04321706.1\| Small, acid-soluble spore protein H 1 [Bacillus cereus m1293], gi\|22... gi\|218901807, gi... - gi\|218901807\|ref\|YP_002449641.1\| small acid-soluble spore protein, H-type [Bacillus cereus AH820], g... gi\|225862587, gi... - gi\|225862587\|ref\|YP_002747965.1\| small acid-soluble spore protein, H-type [Bacillus cereus 03BB102],... gi\|196022034, gi... - gi\|196047164\|ref\|ZP_03114381.1\| small acid-soluble spore protein, H-type [Bacillus cereus 03BB108], ... gi\|196027317, gi... - gi\|196041823\|ref\|ZP_03109112.1\| small acid-soluble spore protein, H-type [Bacillus cereus NVH0597-99... SSPH_BACHK - Small, acid-soluble spore protein H OS=Bacillus thuringiensis subsp. konkukian GN=sspH PE=2 SV=2 gi\|217958200, gi... - gi\|217958200\|ref\|YP_002336744.1\| small acid-soluble spore protein, H-type [Bacillus cereus AH187], g... gi\|206974373, gi... - gi\|206974373\|ref\|ZP_03235290.1\| small acid-soluble spore protein, H-type [Bacillus cereus H3081.97],... SSPH1_BACC1 - Small, acid-soluble spore protein H 1 OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=sspH1 PE=3... gi\|195991700, gi... - gi\|196035733\|ref\|ZP_03103136.1\| small acid-soluble spore protein, H-type [Bacillus cereus W], gi\|195... SSPH_BACHK - Small, acid-soluble spore protein H OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=ssp...	84.0	[0..1]	[58..1]

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Predicted Domain #1

Region A:
Residues: [1-60]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVRRAQEIA SSPVMANVTY NGQRIYIEHV DQQKGVATIH PLDNPNQKQS VPVASLEEHS  60
   61

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	39.180456
Match:	PF08141.3
Description:	No description for PF08141.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits