YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: DOHH_ARATH
Organism: Arabidopsis thaliana
Length: 314 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DOHH_ARATH.

Description E-value Query
Range
Subject
Range
gi|113475509, gi... - gi|71674567|ref|ZP_00672314.1| Armadillo:HEAT:Caspase-1, p20:PBS lyase HEAT-like repeat [Trichodesmi...
232.0 [0..3] [314..624]

Back

Predicted Domain #1
Region A:
Residues: [1-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESNGSVSSM VNLEKFLCER LVDQSQPISE RFRALFSLRN LKGPGPRNAL ILASRDSSNL  60
   61 LAHEAAFALG QMQDAEAIPA LESVLNDMSL HPIVRHEAAE ALGAIGLAGN VNILKKSLSS 120
  121 DPAQEVRETC ELALKRIEDM SNVDAENQSS TTEKSPFMSV DPAGPAASFS SVHQLRQVLL 180
  181 DETKGMYERY AALFALRNHG GEEAVSAIVD SLSASSALLR HEVAYVLGQL QSKTALATLS 240
  241 KVLRDVNEHP MVRHEAAEAL GSIADEQSIA LLEEFSKDPE PIVAQSCEVA LSMLEFENSG 300
  301 KSFEFFFTQD PLVH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.522879
Match: 2jdqA
Description: No description for 2jdqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle