YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|30679055, gi|...
Organism: Arabidopsis thaliana
Length: 556 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30679055, gi|....

Description E-value Query
Range
Subject
Range
PYRG_CARHZ - CTP synthase OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) GN=pyrG ...
690.0 [0..2] [551..3]

Back

Predicted Domain #1
Region A:
Residues: [1-556]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYVLVTGGV VSGLGKGVTA SSIGVVLKAC GLGVTSIKID PYLNTDAGTM SPFEHGEVFV  60
   61 LDDGGEVDLD LGNYERFLDV TLTKDNNITT GKIYQSVLDK ERKGDYLGKT VQVVPHITDA 120
  121 IKDWIESVSL IPVDGKEGQA DVCVIELGGT VGDIESMPFI EALRQLSFSV GPDNFCLIHV 180
  181 SLIPVLGVVG EQKTKPTQHT VRELRALGLT PHFLACRSAQ PLLESTKAKL SQFCHVAAAN 240
  241 ILNIHDVPNI WHVPLLLRNQ NAHHSILKQL NLTNVATAPD LDSWNKMAET FDNLTNHVQI 300
  301 AMVGKYIGLT DSYLSVVKAL LHACIACSLK PHIEWIAASD LEDESEKSTP EAHAAAWKIL 360
  361 KSAECILVPG GFGDRGVSGM VLAAKYAREN KIPYLGICLG MQIAVIEFAR SVLGLERANS 420
  421 TEFDAQTSDP VVIFMPEGSR THMGSTMRLG SRRTHLHNRD SLTSKLYGQV SYVDERHRHR 480
  481 YEVNPEVAQA LEEAGLRFVG KDDTGKRVEV IEFQDHPFYV GVQFHPEFKS RPTRPSPLFL 540
  541 GFILAARKLL QAHLSN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1s1mA
Description: Crystal Structure of E. Coli CTP Synthetase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle