YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|254911688
Organism:	Listeria monocytogenes J2818
Length:	572 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|254911688.

Description	E-value	Query Range	Subject Range
PT1_LISIN - Phosphoenolpyruvate-protein phosphotransferase OS=Listeria innocua serovar 6a (strain CLIP 11262) GN... PT1_LISIN - Phosphoenolpyruvate-protein phosphotransferase OS=Listeria innocua GN=ptsI PE=3 SV=1	649.0	[0..1]	[572..1]
gi\|89085953, gi\|... - gi\|89099344\|ref\|ZP_01172221.1\| PtsI [Bacillus sp. NRRL B-14911], gi\|89085953\|gb\|EAR65077.1\| PtsI [Ba...	643.0	[0..5]	[572..4]
gi\|11596364 - gi\|11596364\|gb\|AAG38584.1\|AF316496_5 enzyme I [Staphylococcus xylosus]	643.0	[0..1]	[571..1]
gi\|52785363, gi\|... - gi\|52785363\|ref\|YP_091192.1\| PtsI [Bacillus licheniformis ATCC 14580], gi\|52347865\|gb\|AAU40499.1\| Pt...	641.0	[0..4]	[569..3]
gi\|89149083, gi\|... - gi\|89202891\|ref\|ZP_01181596.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus subsp...	638.0	[0..1]	[567..1]
gi\|228960315, gi... - gi\|228960315\|ref\|ZP_04121968.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiens... gi\|29897692, gi\|... - gi\|30022135\|ref\|NP_833766.1\| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus ATCC 14... gi\|218235993, gi... - gi\|218235993\|ref\|YP_002368852.1\| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus B42... gi\|228653934, gi... - gi\|229129329\|ref\|ZP_04258300.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus BDRD... gi\|228671904, gi... - gi\|229111522\|ref\|ZP_04241073.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus Rock... gi\|228701927, gi... - gi\|229081305\|ref\|ZP_04213808.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus Rock... gi\|206971003, gi... - gi\|206971003\|ref\|ZP_03231954.1\| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus AH11... gi\|229071553, gi... - gi\|229071553\|ref\|ZP_04204771.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus F651... gi\|228591211, gi... - gi\|229192261\|ref\|ZP_04319226.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus ATCC... gi\|229180327, gi... - gi\|229180327\|ref\|ZP_04307670.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus 1725... gi\|228631213, gi... - gi\|229152251\|ref\|ZP_04280444.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus m155... gi\|228636793, gi... - gi\|229146623\|ref\|ZP_04274990.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus BDRD...	637.0	[0..1]	[567..1]
gi\|218899209, gi... - gi\|218899209\|ref\|YP_002447620.1\| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus G98... gi\|228902559, gi... - gi\|228902559\|ref\|ZP_04066710.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiens... gi\|74490159, gi\|... - gi\|75762349\|ref\|ZP_00742226.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensi...	637.0	[0..1]	[567..1]
gi\|228625589, gi... - gi\|229157632\|ref\|ZP_04285707.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus ATCC... gi\|229140784, gi... - gi\|229140784\|ref\|ZP_04269329.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus BDRD... gi\|228585332, gi... - gi\|229198172\|ref\|ZP_04324881.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus m129... gi\|228597193, gi... - gi\|229186293\|ref\|ZP_04313459.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus BGSC... gi\|254721651 - gi\|254721651\|ref\|ZP_05183440.1\| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis s... gi\|49478507, gi\|... - gi\|49478507\|ref\|YP_038108.1\| phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis ... gi\|47565930, gi\|... - gi\|47565930\|ref\|ZP_00236969.1\| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus G9241... gi\|196030440, gi... - gi\|196038717\|ref\|ZP_03106025.1\| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus NVH0... gi\|196023383, gi... - gi\|196045943\|ref\|ZP_03113172.1\| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus 03BB... gi\|195992518, gi... - gi\|196034979\|ref\|ZP_03102386.1\| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus W], ... gi\|222097498, gi... - gi\|222097498\|ref\|YP_002531555.1\| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus Q1]... gi\|206977395, gi... - gi\|206977395\|ref\|ZP_03238291.1\| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus H308... gi\|217961540, gi... - gi\|217961540\|ref\|YP_002340110.1\| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus AH1... gi\|228916688, gi... - gi\|228916688\|ref\|ZP_04080253.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiens... gi\|228935368, gi... - gi\|228935368\|ref\|ZP_04098188.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiens... gi\|228929097, gi... - gi\|228929097\|ref\|ZP_04092124.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiens... gi\|228772467, gi... - gi\|228987238\|ref\|ZP_04147359.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiens... gi\|228947768, gi... - gi\|228947768\|ref\|ZP_04110055.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiens... gi\|229123571, gi... - gi\|229123571\|ref\|ZP_04252766.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus 95/8... gi\|229093106, gi... - gi\|229093106\|ref\|ZP_04224228.1\| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus Rock...	636.0	[0..1]	[567..1]
gi\|72495531, gi\|... - gi\|73663016\|ref\|YP_301797.1\| phosphoenolpyruvate-protein phosphotransferase [Staphylococcus saprophy...	636.0	[0..1]	[571..1]
gi\|51974913, gi\|... - gi\|52141444\|ref\|YP_085385.1\| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus E33L], ...	635.0	[0..1]	[567..1]

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Predicted Domain #1

Region A:
Residues: [1-572]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKELKGIAA SDGIAIAKAY LLVEPDLSYE KTEVTDVESE VKRFESALEV SRTELSMIRE  60
   61 KAAKDLGEDK AQIFDAHLLV LNDPELTGPI EESIKNSKTN AETALQETTD MFIGMFESMD 120
  121 NEYMRERAAD IKDVRKRVLS HLLGVTIPNP ALIDEEVVVV AADLTPSDTA QLNRNFVKGF 180
  181 VTDIGGRTSH SAIMARSLEI PAVVGTKEVT ASVAKNDIVI IDGLEGNVII HPTEEQIAHY 240
  241 EKIKSDFALQ QAEWDKLKNE KTVSKDGVHV ELAANIGTPN DLEGVISNGG EAVGLYRTEF 300
  301 LYMGRDNFPT EEEQFEAYKA VVSGMDGKSV VVRTLDIGGD KTLPYLELPE EMNPFLGFRA 360
  361 IRLCFANEEL FRTQLRALLR ASVYGNLKIM FPMIATVNEF RQARDILLDE KAKLKAAGTE 420
  421 VSDSIELGIM IEIPAAAVLA DQFAKEVDFF SIGTNDLIQY TMAADRMNER VSYLYQPYNP 480
  481 SILRLVKMVI DASHKEGKWT GMCGEMAGDQ TAVPLLLGLG LDEFSMSASS ILKSRSLIKR 540
  541 LDQSEMVKLA EEALNKSTAE EVVELVEKYT AE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	1000.0
Match:	2hroA
Description:	No description for 2hroA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits