YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|229081899, gi...
Organism:	Bacillus cereus Rock4-2
Length:	65 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|229081899, gi....

Description	E-value	Query Range	Subject Range
gi\|89150394, gi\|... - gi\|89201608\|ref\|ZP_01180346.1\| Small acid-soluble spore protein, alpha/beta type [Bacillus cereus su...	105.0	[0..1]	[65..1]
gi\|56911410, gi\|... - gi\|56965166\|ref\|YP_176898.1\| small acid-soluble spore protein [Bacillus clausii KSM-K16], gi\|5691141...	105.0	[0..2]	[64..4]
gi\|218234199, gi... - gi\|218234199\|ref\|YP_002369441.1\| small, acid-soluble spore protein B [Bacillus cereus B4264], gi\|218... gi\|42783829, gi\|... - gi\|42783829\|ref\|NP_981076.1\| small, acid-soluble spore protein B [Bacillus cereus ATCC 10987], gi\|42... gi\|228960914, gi... - gi\|228960914\|ref\|ZP_04122547.1\| Small, acid-soluble spore protein B [Bacillus thuringiensis serovar ...	103.0	[0..1]	[65..1]
gi\|254757439 - gi\|254757439\|ref\|ZP_05209466.1\| small, acid-soluble spore protein B [Bacillus anthracis str. Austral... gi\|170705569, gi... - gi\|170705569\|ref\|ZP_02896033.1\| small, acid-soluble spore protein B [Bacillus anthracis str. A0389],... gi\|172082918, gi... - gi\|177651092\|ref\|ZP_02933923.1\| small, acid-soluble spore protein B [Bacillus anthracis str. A0174],... gi\|190569067, gi... - gi\|190569067\|ref\|ZP_03021967.1\| small, acid-soluble spore protein B [Bacillus anthracis Tsiankovskii... gi\|196040880, gi... - gi\|196040880\|ref\|ZP_03108178.1\| small, acid-soluble spore protein B [Bacillus cereus NVH0597-99], gi... gi\|30259395, gi\|... - gi\|30264720\|ref\|NP_847097.1\| small, acid-soluble spore protein B [Bacillus anthracis str. Ames], gi\|... gi\|65322017, gi\|... - gi\|65322017\|ref\|ZP_00394976.1\| hypothetical protein Bant_01005543 [Bacillus anthracis str. A2012], r... gi\|165869696, gi... - gi\|165869696\|ref\|ZP_02214354.1\| small, acid-soluble spore protein B [Bacillus anthracis str. A0488],... gi\|167633970, gi... - gi\|167633970\|ref\|ZP_02392293.1\| small, acid-soluble spore protein B [Bacillus anthracis str. A0442],... gi\|49181465, gi\|... - gi\|49187538\|ref\|YP_030791.1\| small, acid-soluble spore protein B [Bacillus anthracis str. Sterne], g... gi\|167638116, gi... - gi\|167638116\|ref\|ZP_02396394.1\| small, acid-soluble spore protein B [Bacillus anthracis str. A0193],... gi\|47530192, gi\|... - gi\|47530192\|ref\|YP_021541.1\| small, acid-soluble spore protein B [Bacillus anthracis str. 'Ames Ance... gi\|170670353, gi... - gi\|170685889\|ref\|ZP_02877112.1\| small, acid-soluble spore protein B [Bacillus anthracis str. A0465],... gi\|227003487, gi... - gi\|227817437\|ref\|YP_002817446.1\| small, acid-soluble spore protein B [Bacillus anthracis str. CDC 68... gi\|228917292, gi... - gi\|228917292\|ref\|ZP_04080847.1\| Small, acid-soluble spore protein B [Bacillus thuringiensis serovar ... gi\|229093742, gi... - gi\|229093742\|ref\|ZP_04224841.1\| Small, acid-soluble spore protein B [Bacillus cereus Rock3-42], gi\|2... gi\|229603143, gi... - gi\|229603143\|ref\|YP_002868928.1\| small, acid-soluble spore protein B [Bacillus anthracis str. A0248]... gi\|254687458 - gi\|254687458\|ref\|ZP_05151314.1\| small, acid-soluble spore protein B [Bacillus anthracis str. CNEVA-9... gi\|254725021 - gi\|254725021\|ref\|ZP_05186804.1\| small, acid-soluble spore protein B [Bacillus anthracis str. A1055] gi\|254736758 - gi\|254736758\|ref\|ZP_05194464.1\| small, acid-soluble spore protein B [Bacillus anthracis str. Western... gi\|254741795 - gi\|254741795\|ref\|ZP_05199482.1\| small, acid-soluble spore protein B [Bacillus anthracis str. Kruger ... gi\|254754607 - gi\|254754607\|ref\|ZP_05206642.1\| small, acid-soluble spore protein B [Bacillus anthracis str. Vollum]	103.0	[0..1]	[65..1]
gi\|221242178, gi... - gi\|222098120\|ref\|YP_002532177.1\| small, acid-soluble spore protein [Bacillus cereus Q1], gi\|22124217... gi\|218905876, gi... - gi\|218905876\|ref\|YP_002453710.1\| small, acid-soluble spore protein B [Bacillus cereus AH820], gi\|218... gi\|217962134, gi... - gi\|217962134\|ref\|YP_002340704.1\| small, acid-soluble spore protein B [Bacillus cereus AH187], gi\|217... gi\|206977122, gi... - gi\|206977122\|ref\|ZP_03238021.1\| small, acid-soluble spore protein B [Bacillus cereus H3081.97], gi\|2... gi\|118419012, gi... - gi\|118479787\|ref\|YP_896938.1\| small, acid-soluble spore protein [Bacillus thuringiensis str. Al Haka... gi\|196043807, gi... - gi\|196043807\|ref\|ZP_03111044.1\| small, acid-soluble spore protein B [Bacillus cereus 03BB108], gi\|19... gi\|196033033, gi... - gi\|196033033\|ref\|ZP_03100446.1\| small, acid-soluble spore protein B [Bacillus cereus W], gi\|19599446... gi\|49478715, gi\|... - gi\|49478715\|ref\|YP_038695.1\| small, acid-soluble spore protein [Bacillus thuringiensis serovar konku... gi\|52140861, gi\|... - gi\|52140861\|ref\|YP_085968.1\| small, acid-soluble spore protein [Bacillus cereus E33L], gi\|51974330\|g... gi\|228829879, gi... - gi\|228929700\|ref\|ZP_04092717.1\| Small, acid-soluble spore protein B [Bacillus thuringiensis serovar ... gi\|225866627, gi... - gi\|225866627\|ref\|YP_002752005.1\| small, acid-soluble spore protein B [Bacillus cereus 03BB102], gi\|2... gi\|229124216, gi... - gi\|229124216\|ref\|ZP_04253408.1\| Small, acid-soluble spore protein B [Bacillus cereus 95/8201], gi\|22... gi\|228771820, gi... - gi\|228987897\|ref\|ZP_04148005.1\| Small, acid-soluble spore protein B [Bacillus thuringiensis serovar ... gi\|228811363, gi... - gi\|228948376\|ref\|ZP_04110659.1\| Small, acid-soluble spore protein B [Bacillus thuringiensis serovar ... gi\|228935956, gi... - gi\|228935956\|ref\|ZP_04098766.1\| Small, acid-soluble spore protein B [Bacillus thuringiensis serovar ... gi\|228596642, gi... - gi\|229186905\|ref\|ZP_04314060.1\| Small, acid-soluble spore protein B [Bacillus cereus BGSC 6E1], gi\|2... gi\|228608189, gi... - gi\|229175357\|ref\|ZP_04302872.1\| Small, acid-soluble spore protein B [Bacillus cereus MM3], gi\|228608... gi\|228625212, gi... - gi\|229158254\|ref\|ZP_04286321.1\| Small, acid-soluble spore protein B [Bacillus cereus ATCC 4342], gi\|... gi\|228642164, gi... - gi\|229141383\|ref\|ZP_04269921.1\| Small, acid-soluble spore protein B [Bacillus cereus BDRD-ST26], gi\|... gi\|228584679, gi... - gi\|229198806\|ref\|ZP_04325501.1\| Small, acid-soluble spore protein B [Bacillus cereus m1293], gi\|2285...	102.0	[0..1]	[65..1]
gi\|89100083, gi\|... - gi\|89100083\|ref\|ZP_01172952.1\| small acid-soluble spore protein [Bacillus sp. NRRL B-14911], gi\|8908...	101.0	[0..2]	[65..4]
gi\|3688809 - gi\|3688809\|gb\|AAC62407.1\| SspA [Bacillus firmus]	101.0	[0..2]	[65..4]
gi\|25299033 - pir\|\|B83792 small acid-soluble spore protein (major alpha-type SASP) sspA [imported] - Bacillus halo... gi\|15613701, gi\|... - gi\|15613701\|ref\|NP_242004.1\| small acid-soluble spore protein (major alpha-type SASP) [Bacillus halo...	101.0	[0..2]	[65..3]

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Predicted Domain #1

Region A:
Residues: [1-65]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRSTNKLAV PGAESALDQM KYEIAQEFGV QLGADATARA NGSVGGEITK RLVSLAEQQL  60
   61 GGYQK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	36.376751
Match:	PF00269.11
Description:	No description for PF00269.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits