| Protein: | PIF5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 444 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PIF5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
254.0 | [0..1] | [444..1] |
|
|
175.0 | [0..37] | [351..174] |
|
|
168.0 | [0..37] | [324..174] |
|
|
167.0 | [0..37] | [324..174] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MEQVFADWNF EDNFHMSTNK RSIRPEDELV ELLWRDGQVV LQSQARREPS VQVQTHKQET 60
61 LRKPNNIFLD NQETVQKPNY AALDDQETVS WIQYPPD
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.382 | N/A | N/A | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.382 | N/A | N/A | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.318 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.290 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.289 | N/A | N/A | d.15.1 | Ubiquitin-like |
| View | Download | 0.288 | N/A | N/A | d.15.1 | Ubiquitin-like |
| View | Download | 0.259 | N/A | N/A | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.207 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.201 | N/A | N/A | d.52.6 | BolA-like |
|
Region A: Residues: [98-205] |
1 11 21 31 41 51
| | | | | |
1 DVIDPFESEF SSHFFSSIDH LGGPEKPRTI EETVKHEAQA MAPPKFRSSV ITVGPSHCGS 60
61 NQSTNIHQAT TLPVSMSDRS KNVEERLDTS SGGSSGCSYG RNNKETVS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [206-341] |
1 11 21 31 41 51
| | | | | |
1 GTSVTIDRKR KHVMDADQES VSQSDIGLTS TDDQTMGNKS SQRSGSTRRS RAAEVHNLSE 60
61 RRRRDRINER MKALQELIPH CSRTDKASIL DEAIDYLKSL QMQLQVMWMG SGMAAAAAAA 120
121 ASPMMFPGVQ SSPYIN
|
| Detection Method: | |
| Confidence: | 15.0 |
| Match: | 1am9A |
| Description: | SREBP-1a |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [342-444] |
1 11 21 31 41 51
| | | | | |
1 QMAMQSQMQL SQFPVMNRSA PQNHPGLVCQ NPVQLQLQAQ NQILSEQLAR YMGGIPQMPP 60
61 AGNQMQTVQQ QPADMLGFGS PAGPQSQLSA PATTDSLHMG KIG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
