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View Structure Prediction Details

Protein: ABA4_ARATH
Organism: Arabidopsis thaliana
Length: 220 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ABA4_ARATH.

Description E-value Query
Range
Subject
Range
gi|25404665, gi|... - gi|9755455|gb|AAF98216.1|AC007152_12 Unknown protein [Arabidopsis thaliana], pir||F96694 hypothetica...
336.0 [0..18] [220..1]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFSSFISQP LSSSLSVMKR NVSAKRSELC LDSSKIRLDH RWSFIGGSRI SVQSNSYTVV  60
   61 HKKFSGVRAS WLTTTQIASS VFAVGTTAVL PFYTLMVVAP KAEITKKCME SSVPYIILGV 120
  121 LYVYLLYISW TPETLKYMFS SKYMLPELSG IAKMFSSEMT LASAWIHLLV VDLFAARQVY 180
  181 NDGLENQIET RHSVSLCLLF CPVGIVSHFV TKAIINNQYK 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle