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View Structure Prediction Details

Protein: gi|21536754, gi|...
Organism: Arabidopsis thaliana
Length: 191 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|21536754, gi|....

Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTLSASVSS LNLPSLPPPP QPPLRSISSR FKSTVNATTS ASSTNLSKPT SSSPSSASYS  60
   61 QNRNPNFLKA ISFHLPQTKP SRVVT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.619 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.466 a.60.9 lambda integrase-like, N-terminal domain
View Download 0.432 a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.412 a.29.14 Description not found.
View Download 0.390 a.219.1 Description not found.
View Download 0.378 a.35.1 lambda repressor-like DNA-binding domains
View Download 0.341 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.303 a.60.1 SAM/Pointed domain

Predicted Domain #2
Region A:
Residues: [86-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPPPPVHDKA ASGFAAALVS VCQSKNCLGR TQEDVRRLME FLVGEEKKRN KVLVNDVVER  60
   61 GKFGKHFKGL VKMLIARGKS GILVDVLMEF ERICNELVSK KLVWVS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.6
Match: 2bo5A
Description: Bovine oligomycin sensitivity conferral protein N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle