YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CKX7_ARATH
Organism: Arabidopsis thaliana
Length: 524 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CKX7_ARATH.

Description E-value Query
Range
Subject
Range
gi|89151095, gi|... - gi|89200934|ref|ZP_01179683.1| Glycolate oxidase subunit GlcD [Bacillus cereus subsp. cytotoxis NVH ...
361.0 [0..25] [519..2]

Back

Predicted Domain #1
Region A:
Residues: [1-524]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAYIEPYFL ENDAEAASAA TAAGKSTDGV SESLNIQGEI LCGGAAADIA GRDFGGMNCV  60
   61 KPLAVVRPVG PEDIAGAVKA ALRSDKLTVA ARGNGHSING QAMAEGGLVV DMSTTAENHF 120
  121 EVGYLSGGDA TAFVDVSGGA LWEDVLKRCV SEYGLAPRSW TDYLGLTVGG TLSNAGVSGQ 180
  181 AFRYGPQTSN VTELDVVTGN GDVVTCSEIE NSELFFSVLG GLGQFGIITR ARVLLQPAPD 240
  241 MVRWIRVVYT EFDEFTQDAE WLVSQKNESS FDYVEGFVFV NGADPVNGWP TVPLHPDHEF 300
  301 DPTRLPQSCG SVLYCLELGL HYRDSDSNST IDKRVERLIG RLRFNEGLRF EVDLPYVDFL 360
  361 LRVKRSEEIA KENGTWETPH PWLNLFVSKR DIGDFNRTVF KELVKNGVNG PMLVYPLLRS 420
  421 RWDDRTSVVI PEEGEIFYIV ALLRFVPPCA KVSSVEKMVA QNQEIVHWCV KNGIDYKLYL 480
  481 PHYKSQEEWI RHFGNRWSRF VDRKAMFDPM AILSPGQKIF NRSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.30103
Match: 2exrA
Description: X-Ray Structure of Cytokinin Oxidase/Dehydrogenase (CKX) From Arabidopsis Thaliana AT5G21482
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle