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View Structure Prediction Details

Protein: gi|22325479, gi|...
Organism: Arabidopsis thaliana
Length: 210 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22325479, gi|....

Description E-value Query
Range
Subject
Range
gi|91187693, gi|... - gi|91228747|ref|ZP_01262658.1| hypothetical protein V12G01_06051 [Vibrio alginolyticus 12G01], gi|91...
185.0 [0..24] [200..3]

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Predicted Domain #1
Region A:
Residues: [1-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELQVLVLRP IFFFFFFVFL TILQQSSSAR VLTITKPDRH DYAASARWLV SQNSWGVLST  60
   61 LSVDHKGAPF GNVVSFSDGL PEKGNGIPYF YLTTLDPTAR NALKDQRASL AISESPLGTC 120
  121 TRDPMNPTCS KLTLTGKLLI LEGGSEEAEV AKKALFTKHP EMMDWPKDHD FRFFKLEIID 180
  181 IFLINWYGGA KPITVDEYLH AKSIKLASFL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.221849
Match: 1xhnA
Description: The crystal structure of Cellular Repressor of E1A-stimulated Genes (CREG)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle