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View Structure Prediction Details

Protein: par-1-PQ
Organism: Drosophila melanogaster
Length: 357 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for par-1-PQ.

Description E-value Query
Range
Subject
Range
par-1-PH - The gene par-1 is referred to in FlyBase by the symbol Dmel\par-1 (CG8201, FBgn0260934). It is a pro...
572.0 [0..1] [351..1]

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Predicted Domain #1
Region A:
Residues: [1-151]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQTSSHRQM HHSSNNNNKE EPPQPASQFG NRRTSTRKST SSSKHYPTLV QPLRKDELSL  60
   61 LRDSLLRNGS IMRKNPERRP VTISELKPVN TGQGTSGSVL PITAEDAAGG SSSSITQLMA 120
  121 FQLPVDRSAK TDDLAAESSA SAAAAVAPKE G

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [152-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RNEFYIVGDG YHRTDHCYYR SPNGDFHKLP SDSFHKMSEG CFVRMADGVF RRLEVPTKAQ  60
   61 ISRRSSRAEE IGDATSQGNG SAATNVKSQL MRFLKRSKSH TPATIAKLQR EKEEAR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [268-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AERKQRLSNA LRQKNLAATN AASAAAANSS YASGGGGGTV SSRNNKIVVT MIENGGLPIV  60
   61 ATSKAERPKA KESASSSDKA RNSRIFVTPH 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle