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View Structure Prediction Details

Protein: TCP14_ARATH
Organism: Arabidopsis thaliana
Length: 489 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TCP14_ARATH.

Description E-value Query
Range
Subject
Range
gi|6522545, gi|1... - gi|6522545|emb|CAB61988.1| putative protein [Arabidopsis thaliana], pir||T45722 hypothetical protein...
360.0 [0..37] [489..25]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKPTSSILN VIMDGGDSVG GGGGDDHHRH LHHHHRPTFP FQLLGKHDPD DNHQQQPSPS  60
   61 SSSSLFSLHQ HQQLSQSQPQ SQSQKSQPQT TQKELLQTQE ESAVVAAKKP PLKRASTKDR 120
  121 H

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [122-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKVDGRGRRI RMPALCAARV FQLTRELGHK SDGETIEWLL QQAEPSVIAA TGTGTIPANF  60
   61 TSLNISLRSS GSSMSLPSHF RSAASTFSPN NIFSPAMLQQ QQQQQRGGGV GFHHPHLQGR 120
  121 APTSS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [247-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LFPGIDNFTP TTSFLNFHNP TKQEGDQDSE ELNSEKKRRI QTTSDLHQQQ QQHQHDQIGG  60
   61 YTL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [310-489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QSSNSGSTAT AAAAQQIPGN FWMVAAAAAA GGGGGNNNQT GGLMTASIGT GGGGGEPVWT  60
   61 FPSINTAAAA LYRSGVSGVP SGAVSSGLHF MNFAAPMAFL TGQQQLATTS NHEINEDSNN 120
  121 NEGGRSDGGG DHHNTQRHHH HQQQHHHNIL SGLNQYGRQV SGDSQASGSL GGGDEEDQQD 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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