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View Structure Prediction Details

Protein: DTX21_ARATH
Organism: Arabidopsis thaliana
Length: 494 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX21_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
327.0 [0..26] [486..635]

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Predicted Domain #1
Region A:
Residues: [1-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGGGELTA ALLKKTAENG GEEKDELGLK QKVWIESKKL WIVAAPAIFT RFSTFGVSII  60
   61 SQSFIGHLGP IELAAYSITF TVLLRFSNGI LLGMASALET LCGQAYGAKQ NHMLGIYLQR 120
  121 SWIVLTGCTI CLTPVYIFSG PILLALGQEE RIVRVARIIA LWVIGINFSF VPSFTCQMFL 180
  181 QAQSKNKIIA YVAAVSLGVH VFLSWLLMVH FNFGITGAMT STLVAFWLPN IAQLLFVTCG 240
  241 G

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 36.431798
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [242-494]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CKDTWRGFSM MAFKDLWPVF KLSMSSGGML CLELWYNSIL VLLTGNLKNA EVALDALAIC  60
   61 LNINGLEMMI ALGFLAAASV RVSNELGSGN PKGAKFATLT AVFTSLSLGI VLFFVFLFLR 120
  121 GRVSYIFTTS EAVAAEVADL SPLLAFSILM NSVQPVLSGV AVGAGWQGYV TYVNLACYYL 180
  181 VGIPIGIILG YVVGLQVKGV WIGMLFGIFV QTCVLTVMTL RTDWDQQVST SLRRLNRWVV 240
  241 PESRDVNQVS SEE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 36.468521
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle