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View Structure Prediction Details

Protein: FNRL2_ARATH
Organism: Arabidopsis thaliana
Length: 369 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FNRL2_ARATH.

Description E-value Query
Range
Subject
Range
FENR_MESCR - Ferredoxin--NADP reductase, chloroplastic OS=Mesembryanthemum crystallinum GN=PETH PE=2 SV=1
280.0 [0..1] [369..1]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTMNAAVS LTSSNSSSFP ATSCAIAPER IRFTKGAFYY KSNNVVTGKR VFSIKAQITT  60
   61 ETDTPTPAKK VEKVS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.522879
Match: 1iueA
Description: Crystal Structure Analysis of ferredoxin from Plasmodium falciparum
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [76-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKNEEGVIVN RYRPKEPYTG KCLLNTKITA DDAPGETWHM VFSHQGEIPY REGQSVGVIA  60
   61 DGIDKNGKPH KVRLYSIASS ALGDLGNSET VSLCVKRLVY TNDQGETVKG VCSNFLCDLA 120
  121 PGSDVKLTGP VGKEMLMPKD PNATVIMLAT GTGIAPFRSF LWKMFFEKHD DYKFNGLAWL 180
  181 FLGVPTTSSL LYQEEFDKMK AKAPENFRVD YAISREQAND KGEKMYIQTR MAQYAAELWE 240
  241 LLKKDNTFVY MCGLKGMEKG IDDIMVSLAA NDGIDWFDYK KQLKKAEQWN VEVY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.154902
Match: 1gaqA
Description: Ferredoxin reductase (flavodoxin reductase) N-terminal domain; Ferredoxin reductase (flavodoxin reductase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.923682288946602 bayes_pls_golite062009
oxidoreductase activity 0.6192827046908 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle