| Protein: | acr-9 |
| Organism: | Caenorhabditis elegans |
| Length: | 534 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acr-9.
| Description | E-value | Query Range |
Subject Range |
|
|
438.0 | [0..8] | [533..4] |
|
Region A: Residues: [1-339] |
1 11 21 31 41 51
| | | | | |
1 MISPVLRLTA LHCVLFHLLT EVHSSADEYR LLADLRHNYD PYERPVANAS EPLVVSVKIY 60
61 LQQILDVDEK NQVITLVAWI EYQWTDYKLK WDPSEYGGIK DIRIPGNANA IWKPDVLLYN 120
121 SADENFDSTY PVNYVVSYTG DVLQVPPGIL KLSCKIDITY FPFDDQICHL KFGSWTYSGN 180
181 FIDLRINGPE GKNISDEGID VQYYVQNGEW NLLAVPARHE TNIFDEQPYP SLFFYLIIQR 240
241 RTLYYGLNLI IPSFLISLMT VLGFTLPPDA GEKITLEITI LLSVCFFLSM VADMTPPTSE 300
301 AVPLIGAFFS CCMLVVSASV VFTVLVLNLH NRKPETHEM
|
| Detection Method: |  |
| Confidence: | 80.69897 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [340-534] |
1 11 21 31 41 51
| | | | | |
1 SPFLRELLLI WLPWLLLMRR PGKTIFNCTH LKAEKAEEKA KQGSIKNGVG PGKPTDSVHP 60
61 SEGLSLMKNI KLGRQQTIDF EYEFHVQHNH LMPVAPSEMT PRVTYSKVMA ESYVEDVVMT 120
121 ELNKYMQKAC LELKNISSQT RAMRKKMEED ERDEQAANDW KFAAMVVDRC CLITFSVFIV 180
181 VSTCGIMFSS PHLIA
|
| Detection Method: | |
| Confidence: | 42.0 |
| Match: | 1oedB |
| Description: | Acetylcholine receptor protein, beta chain |
Matching Structure (courtesy of the PDB): |
|
