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View Structure Prediction Details

Protein: TPR3_ARATH
Organism: Arabidopsis thaliana
Length: 1108 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for TPR3_ARATH.

Predicted Domain #1
Region A:
Residues: [1-185]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLSRELVF LILQFLEEEK FKESVHRLEK ESGFFFNTKY FDEKVLAGEW DDVETYLSGF  60
   61 TKVDDNRYSM KIFFEIRKQK YLEALDRQEK AKAVEILVQD LRVFSTFNEE LYKEITQLLT 120
  121 LQNFRENEQL SKYGDTKTAR GIMLGELKKL IEANPLFRDK LMFPTLRSSR LRTLINQSLN 180
  181 WQHQL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [186-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CKNPRPNPDI KTLFTDHTCT LPNGPLAPSA VNQPVTTLTK PAAYPSLGPH VPFPPGPAAA  60
   61 NAGALASWMA AASGASAVQA AVVTPALMPQ PQNQMSILKR PRTPPATPGI VDYQNPDHEL 120
  121 MKRLRPAPSV EEVTYPAPRQ QAPWSLEDLP TKAALALHQG STVTSMEFYP MQNTLLLVGS 180
  181 ATGEITLWEL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.045757
Match: 2hesX
Description: No description for 2hesX was found.

Predicted Domain #3
Region A:
Residues: [376-438]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AARERLVSRP FKIWDMSNCS HQFQALIAKE TPISVTRVAW SPDGNFIGVA FTKHLIQLYA  60
   61 FSG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.69897
Match: 2oajA
Description: No description for 2oajA was found.

Predicted Domain #4
Region A:
Residues: [439-571]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PNDLRQHTEI DAHVGAVNDL AFANPNRQLC VITCGDDKLI KVWDVSGRKH FTFEGHDAPV  60
   61 YSICPHYKEN IQFIFSTAID GKIKAWLYDN LGSRVDYDAP GKWCTRMLYS ADGTRLFSCG 120
  121 TSKDGDSFLV EWN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 77.69897
Match: 2gnqA
Description: No description for 2gnqA was found.

Predicted Domain #5
Region A:
Residues: [572-701]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESEGSIKRTY KEFQKKLAGV VQFDTSKNHF LAVGEDGQIK FWDMNNINVL TSTDAEGGLP  60
   61 ALPHLRFNKD GNLLAVTTAD NGFKILANPA GFRSLRAMET PASETMRTPV DFKAVPGAPV 120
  121 ASVNCKVERG 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [702-793]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPVRHSQMLN GVDPSKSRID DSTDKPKSWQ LAEILDPSQC FQATLPDTAG SSTKVVQLLY  60
   61 TNSGAGILAL GSNGIQRLWK WVPNEQNPSG KA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.69897
Match: 3dm0A
Description: No description for 3dm0A was found.

Predicted Domain #7
Region A:
Residues: [794-1108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TATVVPQHWQ PNSGLLMTND VSGVNLENAA PCIALSKNDS YVMSAAGGKV SLFNMMTFKV  60
   61 MTTFMPPPPA STFLAFHPQD NNVIAIGMED STIHIYNVRV DEVKSKLKGH QKRITGLAFS 120
  121 TALNILVSSG ADAQICFWSI DTWEKRKSVA IQMPAGKAAN GDTRVQFHVD QLRILVVHET 180
  181 QLAVFDASKM ECIRQWIPQD SLSAPISSAV YACNSQLIYT TFRDGNIGVF DADSLRLRCR 240
  241 ISPSAYLPQG NQGLSPLVVA AHPQDPNQFA VGLNDGSVKM MEPTEGEGKW GMIPPSEAIN 300
  301 SPSTTSNQTP EQLQR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.09691
Match: 1erjA
Description: Tup1, C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle