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View Structure Prediction Details

Protein: TCP2_ARATH
Organism: Arabidopsis thaliana
Length: 365 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TCP2_ARATH.

Description E-value Query
Range
Subject
Range
gi|7486304, gi|7... - pir||T04535 hypothetical protein F28J12.50 - Arabidopsis thaliana, gi|7268632|emb|CAB78841.1| teosin...
294.0 [0..6] [365..1]

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Predicted Domain #1
Region A:
Residues: [1-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGDLMKNNN NGDVVDNEVN NRLSRWHHNS SRIIRVSRAS GGKDRHSKVL TSKGPRDRRV  60
   61 RLSVSTALQF YDLQDRLGYD QPSKAVEWLI KAAEDSISEL PSLNNTHFPT DDENHQNQTL 120
  121 TTVAANSLSK SACSSNSDTS KNSSGLSLSR SELRDKARER ARERTAKETK ERDHNHTSFT 180
  181 DLLNSGSDPV NSNRQW

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [197-365]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAPSSSPM EYFSSGLILG SGQQTHFPIS TNSHPFSSIS DHHHHHPHHQ HQEFSFVPDH  60
   61 LISPAESNGG AFNLDFNMST PSGAGAAVSA ASGGGFSGFN RGTLQSNSTN QHQSFLANLQ 120
  121 RFPTSESGGG PQFLFGALPA ENHHHNHQFQ LYYENGCRNS SEHKGKGKN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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