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View Structure Prediction Details

Protein: ppk28-PA
Organism: Drosophila melanogaster
Length: 606 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ppk28-PA.

Description E-value Query
Range
Subject
Range
ppk28-PB - The gene pickpocket 28 is referred to in FlyBase by the symbol Dmel\ppk28 (CG4805, FBgn0030795). It ...
503.0 [0..1] [606..1]

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Predicted Domain #1
Region A:
Residues: [1-535]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTLTESRRR QSGSSGCKKD SESDDDENTI CSRAAIKRSV VYYLKNSTLH GLKYIAEESI  60
   61 TIPERIFFGL AFVLVVILSV FFISNVYVKW SASPIIISTS AKQKLTSNMP FPAITICNLN 120
  121 QALLSKVDRI GRTSTNFSLL MGLCDQGGDT TISYIGTWKY FKAILVDVAQ PCEKMLLYCS 180
  181 FGSREEDCSW LFTSILTDDG LCCNFNALHP SYLIRNYSDD VRLETAHPNT RYELIDWTPE 240
  241 KGYARNLPEF YFPRTSGGTG IRMGLTVVLN ASIAEYYCTK SMSVGFKVLV HNPAELPKVS 300
  301 NYGFVVTAGR EARIPIEPVY EDALPTIRSI KKSVRRCLFS DENDLAYYRT YSRKNCELEC 360
  361 EAKLLLRECS CVLYYLPRID PLARVCGPND NQCTDRVQTE IESSLTNLSC ENCWPGCFEL 420
  421 TYRATLSTAS IVSDPRFQAG ENLPEYIFHG PYSNASEISI LHFYYMTNIF RSTTKSEMFG 480
  481 FTEFLSNTGG LLGLFMGFSI FSVIEIFFYI TVRPYCASRT LRQRHKRRLE QLSWL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.045757
Match: 2qtsA
Description: No description for 2qtsA was found.

Predicted Domain #2
Region A:
Residues: [536-606]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPIRMPVRRA LRRNRGGLLR NPPPPAYSDL QKFRGKLDKP ETCKRKLWRT LQVRPVVDRA  60
   61 DEELPTYPYL D

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle