| Protein: | E2FA_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 485 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for E2FA_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
512.0 | [0..1] | [485..1] |
|
|
420.0 | [0..24] | [483..2] |
|
|
397.0 | [0..9] | [468..2] |
|
|
392.0 | [0..85] | [480..30] |
|
|
391.0 | [0..47] | [479..1] |
|
|
391.0 | [0..10] | [480..3] |
|
Region A: Residues: [1-149] |
1 11 21 31 41 51
| | | | | |
1 MSGVVRSSPG SSQPPPPPPH HPPSSPVPVT STPVIPPIRR HLAFASTKPP FHPSDDYHRF 60
61 NPSSLSNNND RSFVHGCGVV DREEDAVVVR SPSRKRKATM DMVVAPSNNG FTSSGFTNIP 120
121 SSPCQTPRKG GRVNIKSKAK GNKSTPQTP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [150-241] |
1 11 21 31 41 51
| | | | | |
1 ISTNAGSPIT LTPSGSCRYD SSLGLLTKKF VNLIKQAKDG MLDLNKAAET LEVQKRRIYD 60
61 ITNVLEGIDL IEKPFKNRIL WKGVDACPGD ED
|
| Detection Method: | |
| Confidence: | 27.69897 |
| Match: | 1cf7A |
| Description: | Cell cycle transcription factor E2F-4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [242-405] |
1 11 21 31 41 51
| | | | | |
1 ADVSVLQLQA EIENLALEEQ ALDNQIRQTE ERLRDLSENE KNQKWLFVTE EDIKSLPGFQ 60
61 NQTLIAVKAP HGTTLEVPDP DEAADHPQRR YRIILRSTMG PIDVYLVSEF EGKFEDTNGS 120
121 GAAPPACLPI ASSSGSTGHH DIEALTVDNP ETAIVSHDHP HPQP
|
| Detection Method: | |
| Confidence: | 35.39794 |
| Match: | 2azeA |
| Description: | Structure of the Rb C-terminal domain bound to an E2F1-DP1 heterodimer |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [406-485] |
1 11 21 31 41 51
| | | | | |
1 GDTSDLNYLQ EQVGGMLKIT PSDVENDESD YWLLSNAEIS MTDIWKTDSG IDWDYGIADV 60
61 STPPPGMGEI APTAVDSTPR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.702 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.635 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.589 | d.10.1 | DNA-binding domain |
| View | Download | 0.554 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.486 | d.82.1 | Copper amine oxidase, domain N |
| View | Download | 0.455 | d.93.1 | SH2 domain |
| View | Download | 0.437 | d.93.1 | SH2 domain |
| View | Download | 0.435 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
