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View Structure Prediction Details

Protein: BCA2_ARATH
Organism: Arabidopsis thaliana
Length: 331 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BCA2_ARATH.

Description E-value Query
Range
Subject
Range
gi|79327881 - gi|79327881|ref|NP_001031884.1| CA2 (CARBONIC ANHYDRASE 2); carbonate dehydratase/ zinc ion binding ...
390.0 [0..1] [331..1]
gi|7436820, gi|1... - pir||T09797 carbonate dehydratase (EC 4.2.1.1) 1b - Populus tremula x Populus tremuloides, gi|135451...
369.0 [0..6] [331..2]
gi|20502881 - gi|20502881|gb|AAM22683.1|AF482951_1 carbonic anhydrase [Gossypium hirsutum]
363.0 [0..6] [331..2]
CAHC_SPIOL - Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2
358.0 [0..8] [331..2]
gi|169057, gi|227784 - gi|227784|prf||1710354A carbonic anhydrase, gi|169057|gb|AAA33652.1| carbonic anhydrase
356.0 [0..6] [331..2]
gi|45451864 - gi|45451864|gb|AAS65454.1| chloroplast carbonic anhydrase precursor [Thlaspi caerulescens]
356.0 [0..6] [331..2]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPFWTTVSR NGSSDSETTL QSASKATKQY KYPSLRPSHR LSLLFLFPFH LSANGACFRC  60
   61 TCFSHFKLEL RRMGNESYED AIEALKKLLI EKDDLKDVAA AKVKKITAEL QAASSSDS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [119-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSFDPVERIK EGFVTFKKEK YETNPALYGE LAKGQSPKYM VFACSDSRVC PSHVLDFHPG  60
   61 DAFVVRNIAN MVPPFDKVKY AGVGAAIEYA VLHLKVENIV VIGHSACGGI KGLMSFPLDG 120
  121 NNSTDFIEDW VKICLPAKSK VLAESESSAF EDQCGRCERE AVNVSLANLL TYPFVREGVV 180
  181 KGTLALKGGY YDFVNGSFEL WELQFGISPV HSI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.39794
Match: 1ekjA
Description: beta-carbonic anhydrase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle