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View Structure Prediction Details

Protein: WVD2_ARATH
Organism: Arabidopsis thaliana
Length: 202 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WVD2_ARATH.

Description E-value Query
Range
Subject
Range
gi|22327160 - gi|22327160|ref|NP_680247.1| WVD2 (wave-dampened2) [Arabidopsis thaliana]
153.0 [0..1] [200..1]
gi|92877541 - gi|92877541|gb|ABE84619.1| Targeting for Xklp2 [Medicago truncatula]
125.0 [0..17] [202..492]
gi|50934761, gi|... - gi|50934761|ref|XP_476908.1| putative seed specific protein [Oryza sativa (japonica cultivar-group)]...
115.0 [0..25] [195..141]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRREVFESVS TNASNERVHV APKIAAEEQD YEEKECTEEN SLSQNHKSSN VITENDSKKK  60
   61 NLDEEDDCSV ASSMKNAK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [79-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKVTHGTAPR FRSAQRAEKR KEYYQKLEEK HQALEAERIE LEQRQKEEQE AAIKQLRKNL  60
   61 KFKANPVPDF YYQRPPVKPE LKKFPLTRPK SPKLNLSRRK SCSDAITSSG EENSNSQNRQ 120
  121 SVVE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 26.552842
Match: PF06886.3
Description: No description for PF06886.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle