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View Structure Prediction Details

Protein: BZP68_ARATH
Organism: Arabidopsis thaliana
Length: 389 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BZP68_ARATH.

Description E-value Query
Range
Subject
Range
gi|10801370, gi|... - pir||H86445 probable G-Box binding protein [imported] - Arabidopsis thaliana, gi|10801370|gb|AAG234...
175.0 [0..1] [389..1]

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Predicted Domain #1
Region A:
Residues: [1-132]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSEMEKSG KEKEPKTTPP STSSSAPATV VSQEPSSAVS AGVAVTQDWS GFQAYSPMPP  60
   61 HGYVASSPQP HPYMWGVQHM MPPYGTPPHP YVTMYPPGGM YAHPSLPPGS YPYSPYAMPS 120
  121 PNGMAEASGN TG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [133-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVIEGDGKPS DGKEKLPIKR SKGSLGSLNM IIGKNNEAGK NSGASANGAC SKSAESGSDG  60
   61 SSDGSDANSQ NDSGSRHNGK DGETASE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [220-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGGSAHGPPR NGSNLPVNQT VAIMPVSATG VPGPPTNLNI GMDYWSGHGN VSGAVPGVVV  60
   61 DGSQSQPWLQ VSDEREIKRQ RRKQSNRESA RRSRLRKQAE CDELAQRAEV LNGENSSLRA 120
  121 EINKLKSQYE ELLAENSSLK NKFSSAPSLE GGDLDKNEQE PQRSTRQDVA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.522879
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle