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View Structure Prediction Details

Protein: gi|20259884, gi|...
Organism: Arabidopsis thaliana
Length: 258 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20259884, gi|....

Description E-value Query
Range
Subject
Range
gi|62130416, gi|... - gi|62182783|ref|YP_219200.1| elongation factor P [Salmonella enterica subsp. enterica serovar Choler...
285.0 [0..7] [257..28]

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Predicted Domain #1
Region A:
Residues: [1-258]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGLHHFKRI SISRSLFSFS NATSPGAVTT RRSLYSLSRS LLSSTPYAAG GCCRETPPLH  60
   61 SPWSALQRRG VKVNAIQLRA GNVIERTGRT FRVVEAEHKQ QGRGGASIQV ELRDVDTGNK 120
  121 LNLRFGSEES VEKVFVEEKS FTCLYAEGDT AYLIEPNTFE QVEVPLDIFG KAAVYLKEEM 180
  181 KVQLQLYDGR ALSASIPKHI TCTVVETQLP MKGLTSAPRY KRALLDNGST IQVPSYLEAG 240
  241 EKIVINTEDD SFVKRDNK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.221849
Match: 1ybyA
Description: Conserved hypothetical protein Cth-95 from Clostridium thermocellum
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle