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View Structure Prediction Details

Protein: UXS1_ARATH
Organism: Arabidopsis thaliana
Length: 435 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for UXS1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQLHKQMSS KRDEETIPMS QSSPYSPKTL KHPRSLPRSL HYLFREQRLL FILVGILIGS  60
   61 TFFILQPSLS RLGAAESTSL ITRSVSYAVT DSPPSRSTFN SGGGGGRTGR VPVGIGRKR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [120-435]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRIVVTGGAG FVGSHLVDKL IGRGDEVIVI DNFFTGRKEN LVHLFSNPRF ELIRHDVVEP  60
   61 ILLEVDQIYH LACPASPVHY KYNPVKTIKT NVMGTLNMLG LAKRVGARFL LTSTSEVYGD 120
  121 PLEHPQKETY WGNVNPIGER SCYDEGKRTA ETLAMDYHRG AGVEVRIARI FNTYGPRMCL 180
  181 DDGRVVSNFV AQTIRKHPMT VYGDGKQTRS FQYVSDLVEG LVALMENDHV GPFNLGNPGE 240
  241 FTMLELAEVV KEVIDPSATI EFKPNTADDP HKRKPDISKA KEQLNWEPKI SLREGLPRMV 300
  301 SDFRNRILNE DEGKGL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.522879
Match: 2b69A
Description: Crystal Structure of Human UDP-glucoronic acid decarboxylase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle