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View Structure Prediction Details

Protein: SBT11_ARATH
Organism: Arabidopsis thaliana
Length: 774 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SBT11_ARATH.

Description E-value Query
Range
Subject
Range
gi|7435656, gi|1... - pir||T07172 subtilisin-like proteinase (EC 3.4.21.-) 2 - tomato, gi|3687307|emb|CAA07000.1| subtilis...
491.0 [0..1] [773..1]

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Predicted Domain #1
Region A:
Residues: [1-684]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRFLLMLLF PFSDNRPMMF FRSFIVFFFL IFFASNVSSR KQTYVIHTVT TSTKHIVTSL  60
   61 FNSLQTENIN DDDFSLPEIH YIYENAMSGF SATLTDDQLD TVKNTKGFIS AYPDELLSLH 120
  121 TTYSHEFLGL EFGIGLWNET SLSSDVIIGL VDTGISPEHV SFRDTHMTPV PSRWRGSCDE 180
  181 GTNFSSSECN KKIIGASAFY KGYESIVGKI NETTDFRSTR DAQGHGTHTA STAAGDIVPK 240
  241 ANYFGQAKGL ASGMRFTSRI AAYKACWALG CASTDVIAAI DRAILDGVDV ISLSLGGSSR 300
  301 PFYVDPIAIA GFGAMQKNIF VSCSAGNSGP TASTVSNGAP WLMTVAASYT DRTFPAIVRI 360
  361 GNRKSLVGSS LYKGKSLKNL PLAFNRTAGE ESGAVFCIRD SLKRELVEGK IVICLRGASG 420
  421 RTAKGEEVKR SGGAAMLLVS TEAEGEELLA DPHVLPAVSL GFSDGKTLLN YLAGAANATA 480
  481 SVRFRGTAYG ATAPMVAAFS SRGPSVAGPE IAKPDIAAPG LNILAGWSPF SSPSLLRSDP 540
  541 RRVQFNIISG TSMACPHISG IAALIKSVHG DWSPAMIKSA IMTTARITDN RNRPIGDRGA 600
  601 AGAESAATAF AFGAGNVDPT RAVDPGLVYD TSTVDYLNYL CSLNYTSERI LLFSGTNYTC 660
  661 ASNAVVLSPG DLNYPSFAVN LVNG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.0
Match: 2p4eP
Description: No description for 2p4eP was found.

Predicted Domain #2
Region A:
Residues: [685-774]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ANLKTVRYKR TVTNVGSPTC EYMVHVEEPK GVKVRVEPKV LKFQKARERL SYTVTYDAEA  60
   61 SRNSSSSSFG VLVWICDKYN VRSPIAVTWE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.522879
Match: 1xf1A
Description: Structure of C5a peptidase- a key virulence factor from Streptococcus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle