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View Structure Prediction Details

Protein: NSP5_ARATH
Organism: Arabidopsis thaliana
Length: 326 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NSP5_ARATH.

Description E-value Query
Range
Subject
Range
gi|76639672 - gi|76639672|ref|XP_884903.1| PREDICTED: similar to Leucine-zipper-like transcriptional regulator 1 (...
283.0 [0..6] [321..52]

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Predicted Domain #1
Region A:
Residues: [1-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCPVENKWLK VGQKGAGPGA RSSHAMTVVG NKVYCFGGEL KPTIHIDNDL YVFDLETQEW  60
   61 SIAPATGEAP FPCFGVSMVT IGSTIYVYGG RDDKRRYNGL HSYDTETNEW KLLAPVEEGL 120
  121 PGRSYHSMAG DDRKVYVFGG VTAKGRVNTL HAYDVVDQKW VEYPAAGEAC KGRGAPGLVV 180
  181 VEGRIWVLFG FDGNELGDIH CFDLASEQWK AVETTGDVPA ARSVFPAVSY GKYIVIYGGE 240
  241 EEPHELMHMG AGKMSGEVYQ LDTETLVWER IVCGNEEEKP SQRGWCAFTK AVKDGEEGLL 300
  301 VHGGNSPTNE RLDDLVFWGF SHLNVN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.154902
Match: 1x2jA
Description: Structural basis for the defects of human lung cancer somatic mutations in the repression activity of Keap1 on Nrf2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle