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View Structure Prediction Details

Protein: gi|15451054, gi|...
Organism: Arabidopsis thaliana
Length: 339 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15451054, gi|....

Description E-value Query
Range
Subject
Range
gi|21593275 - gi|21593275|gb|AAM65224.1| unknown [Arabidopsis thaliana]
238.0 [0..1] [339..1]
gi|116054769 - gi|116054769|emb|CAL56846.1| unnamed protein product [Ostreococcus tauri]
169.0 [0..72] [339..26]
gi|67668302, gi|... - gi|67668302|ref|ZP_00465479.1| Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-te...
160.0 [0..64] [310..298]
gi|125604318, gi... - gi|50948459|ref|XP_483757.1| putative auxin-regulated protein [Oryza sativa (japonica cultivar-group...
gi|125562545 - gi|125562545|gb|EAZ07993.1| hypothetical protein OsI_30255 [Oryza sativa Indica Group]
157.0 [0..73] [339..73]
gi|114798543, gi... - gi|114798543|ref|YP_759045.1| glutathione S-transferase [Hyphomonas neptunium ATCC 15444], gi|114738...
155.0 [0..103] [308..4]
gi|109105896 - gi|109105896|ref|XP_001118440.1| PREDICTED: eukaryotic translation elongation factor 1 gamma [Macaca...
153.0 [0..17] [305..23]

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Predicted Domain #1
Region A:
Residues: [1-141]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGILVNNIL PQPPILRSLS SSSRRSSIRT LVMVKASSSE PSESVSVSTK TSDDTGAVVV  60
   61 FTAPPGFKPP EPKRFAVKSG KLFDVLGAAI GLFFRFGTGV FVSGYSASFV SKEEIPADQY 120
  121 ALRLGGITVK ETAKVGPRPE K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [142-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIEIYEFEGC PFCRKVREMV AVLDLDILYY PCPRGSPNFR PKVKQMGGKQ QFPYMVDPNT  60
   61 GVSMYESDGI IKYLSEKYGD GTVPLSLSLG ALTAITAGFA MIGRMGKGNL YTPAKLPPKP 120
  121 LEFWAYEGSP FCKLVREVLV ELELPHIQRS CARGSPKRQV LLEKAGHFQV PYLEDPNTGV 180
  181 AMFESAEIVE YLKQTYAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.09691
Match: 1jlvA
Description: Class delta GST
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle