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View Structure Prediction Details

Protein: fut-5
Organism: Caenorhabditis elegans
Length: 378 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fut-5.

Description E-value Query
Range
Subject
Range
gi|50744682 - gi|50744682|ref|XP_419830.1| PREDICTED: similar to KIAA0776 protein [Gallus gallus]
364.0 [0..5] [362..347]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHNTLRAVF QFSFFIGICT FIMIAGYSYQ INYNQRMGIF YGGNITFKKV PKVVIYTATP  60
   61 FFDVPIENSI LRDCSEKIKN SCTVTSNNKT FPIADAIVFH SRDINETKLS FFNKNRRYDI 120
  121 PYIMMAMENP FFAGLTVY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [139-378]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HNFFNWTMTY RTDSDIFHPY GAFVKSYVPA EVNYSEIWNS KTKETLWMVS NGNAQNKRKE  60
   61 LVEKLIKKGM SIDLYGQLYK KEPAECPRRR GPPGCDVKFH SPYKFAIAFE NSNCKDYVTE 120
  121 KFWKKAGIYK TVPIVMSRKI YRDLGIPDSM YIAVDDYPNL EEFVHHIQNV TSNEEEYMKY 180
  181 HKWRKQFKIV DTNEGNIGFC QLCQKLAGYK RKLVPHKVYE NLNSWHSTST CDNSFATRFL 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.154902
Match: 2nzwA
Description: No description for 2nzwA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle