YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|18410311, gi|...
Organism: Arabidopsis thaliana
Length: 215 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18410311, gi|....

Description E-value Query
Range
Subject
Range
gi|23198316 - gi|23198316|gb|AAN15685.1| putative trypsin inhibitor [Arabidopsis thaliana]
278.0 [0..1] [215..1]

Back

Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKTTKTMNP KFYLVLALTA VLASNAYGAV VDIDGNAMFH ESYYVLPVIR GRGGGLTLAG  60
   61 RGGQPCPYDI VQESSEVDEG IPVKFSNWRL KVAFVPESQN LNIETDVGAT ICIQSTYWRV 120
  121 GEFDHERKQY FVVAGPKPEG FGQDSLKSFF KIEKSGEDAY KFVFCPRTCD SGNPKCSDVG 180
  181 IFIDELGVRR LALSDKPFLV MFKKANVTEV SSKTM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.69897
Match: 1avaC
Description: Amylase/subtilisin inhibitor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle