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View Structure Prediction Details

Protein: gi|15222786, gi|...
Organism: Arabidopsis thaliana
Length: 325 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15222786, gi|....

Description E-value Query
Range
Subject
Range
gi|25295905, gi|... - gi|8778303|gb|AAF79312.1|AC002304_5 F14J16.8 [Arabidopsis thaliana], pir||G96599 protein F14J16.8 [i...
238.0 [0..1] [325..1]

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Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSITNEEAVK QLRALMEDVD DSLRESYRNI HQGYPTENLL RFLKARDGNV QKAHKMLLEC  60
   61 LEWRTQNEID KILTKPIVPV DLYRGIRDTQ LVGVSGYSKE GLPVIAIGVG LSTYDKASVH 120
  121 YYVQSHIQMN EYRDRVVLPS ASKKQGRPIC TCLKILDMSG LKLSALSQIK LMTAITTIDD 180
  181 LNYPEKTETY YVVNVPYIFS ACWKTIKPLL QERTKKKIQV LKGCGKDELL KIMDYESLPH 240
  241 FCRREGSGSG RHISNGTVDN CFSLDHSFHQ DLYDYVKQQA LVKGSGAPIR HGSVHVKFPE 300
  301 PDTEGNKIFD TLENEFQKLG NDQKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.69897
Match: 1o6uA
Description: The Crystal Structure of Human Supernatant Protein Factor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle