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View Structure Prediction Details

Protein: NAC89_ARATH
Organism: Arabidopsis thaliana
Length: 340 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAC89_ARATH.

Description E-value Query
Range
Subject
Range
gi|9757809 - gi|9757809|dbj|BAB08327.1| NAM (no apical meristem)-like protein [Arabidopsis thaliana]
393.0 [0..16] [340..1]

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Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTKAVGVSK DTAASMEAST VFPGFKFSPT DVELISYYLK RKMDGLERSV EVIPDLEIYN  60
   61 FEPWDLPDKS IVKSDSEWFF FCARGKKYPH GSQNRRATKM GYWKATGKER DVKSGSEVIG 120
  121 TKRTLVFHIG RAPKGERTDW IMHEYCVKGV SLDDAMVVCR VRRNKEYNSG 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.154902
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [171-340]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSQKAPKPNS SAEKHAKVQN GATSSGSPSD WDNLVDFYLA GESGEKLLAE MAESSENLQV  60
   61 DNDEDFFADI LRDEIINLDE AVMTGNTPNE VPTLESASME IRVLPLPNMI DKQMSSLLEE 120
  121 RPSQKKKGKD ATESLSSCFV GLYSIKSVNK ARWDVIIGVV ALIAMLFYLE 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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