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View Structure Prediction Details

Protein: gi|18491133, gi|...
Organism: Arabidopsis thaliana
Length: 302 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18491133, gi|....

Description E-value Query
Range
Subject
Range
gi|7485258, gi|7... - pir||T01544 hypothetical protein A_IG005I10.11 - Arabidopsis thaliana, gi|7267114|emb|CAB80785.1| A...
339.0 [0..1] [302..1]

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Predicted Domain #1
Region A:
Residues: [1-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTPKQIDFS SCVGADNSNG TLSHRRSPRN IPSSKRAASV AEEETMKKKM KMKKKKKKLD  60
   61 PPLIVRIWNE EDELSILKGL VDYRAKTGFN PKIDWDAFCS FLGSSIVERF SKDQVLSKIR 120
  121 KLKRRFHVHS EKINQGNDPK FTRSSDSEAF GFSSMIWGQG DDDGMDKEHE VNGNGAAENR 180
  181 TNESGEEMLK EHEE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 54.107905
Match: PF04504.5
Description: No description for PF04504.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [195-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EVANTELLNE NGAAKTTENG TSSGKERHDE DNDDDDELCA VQDAFEAVMS QGLSGYQKKL  60
   61 QLEKLMNLGN GKRRELSDEW KALCVEETRF NIKKLRFSAK LAEAANDS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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