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View Structure Prediction Details

Protein: IBR3_ARATH
Organism: Arabidopsis thaliana
Length: 824 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for IBR3_ARATH.

Predicted Domain #1
Region A:
Residues: [1-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSTGDLVT RIQSAHRFDH DALFRFAADN VSGFPTNPSQ FKVSQFGHGQ SNPTFLIEVG  60
   61 SGSSLKRYVL RKKPPGKLLQ SAHAVDREFQ VLRALGEHTQ VPVPKVFCLC TDPAVIGTAF 120
  121 YIMEFMEGRI FIDPKLPNVA PERRNAIYRA TAKALASLHS ADVDAIGLEK YGRRGNYCKR 180
  181 QIDRWFKQYL ASTSEGKPER NPKMFELVDW LRKNIPAEDS TGATSGLVHG DFRIDNLVFH 240
  241 PSEDRVIGII DWELSTLGNQ MCDVAYSCMH YIVNVQLDKE HVSEGFETTG LPEGMLSMPE 300
  301 FLLEYCSASG KPWPAANWKF YVAFSLFRAA SIYTGVYSRW LMGNASAGER ARNTGVQANE 360
  361 LVESALGYIA RENVLPEHPP SVQRDVSPSY ESLVDGSGRF IPNRKVLELR QKLIKFMETH 420
  421 IYPMENEFSK LAQSDM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.154902
Match: 3dxpA
Description: No description for 3dxpA was found.

Predicted Domain #2
Region A:
Residues: [437-824]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RWTVHPQEEK LKEMAKREGL WNLFVPVDSA ARARRELAAT ENKHNLSGKS FDQLFGEGLT  60
   61 NLEYGYLCEI MGRSVWAPQV FNCGAPDTGN MEVILRYGNK EQISEWLIPL LEGRIRSGFA 120
  121 MTEPQVASSD ATNIECSIRR QGDSYVINGT KWWTSGAMDP RCRVLILMGK TDFNAPKHKQ 180
  181 QSMILVDMRT PGISVKRPLT VFGFDDAPHG HAEISFENVV VPAKNILLGE GRGFEIAQGR 240
  241 LGPGRLHHCM RLIGAAERGM ELMAQRALSR KTFGKFIAQH GSFVSDLAKL RVELEGTRLL 300
  301 VLEAADHLDK FGNKKARGIL AMAKVAAPNM ALKVLDTAIQ VHGAAGVSSD TVLAHLWATA 360
  361 RTLRIADGPD EVHLGTIGKL ELQRASKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 120.0
Match: 1jqiA
Description: Butyryl-CoA dehydrogenase, C-domain; Butyryl-CoA dehydrogenase, NM domains
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle