| Protein: | HDA18_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 682 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HDA18_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
448.0 | [0..1] | [672..1] |
|
Region A: Residues: [1-424] |
1 11 21 31 41 51
| | | | | |
1 MLLKFEASSE LRLVDPSVSL TVLRKIRLSH LPDMTMTSES SGKKCGEGDG KVAGKSQRKV 60
61 GLVYDETMCK HDTPNGKVDV ECPDRIRVIW EKLQLAGVTQ RCVVLGGSKA EDKHLKLVHT 120
121 KKHVNLVKSI STKKKDSRRN KIASQLDSIY LNGGSSEAAY LAAGSVVKVA EKVAEGELDC 180
181 GFAIVRPPGH HAESDEAMGF CLFNNVAVAA SFLLNERPDL DVKKILIVDW DIHHGNGTQK 240
241 MFWKDSRVLI FSVHRHDHGS FYPFGDDGDF NMVGEGPGEG FNINVPWEQG GCGDADYLAV 300
301 WNHILIPVTK EFKPDIILLS AGFDAAIGDP LGGCCVTPYG YSVMLKKLME FAHGKIVLAL 360
361 EGGYNLESLG KSSLACVQVL LEDKQIHGSS ETYPLESTRR VIQAVRERLC TYWPSLDASM 420
421 ASNE
|
| Detection Method: |  |
| Confidence: | 80.69897 |
| Match: | 2nvrA |
| Description: | No description for 2nvrA was found. |
|
Region A: Residues: [425-682] |
1 11 21 31 41 51
| | | | | |
1 NLKNPSAERN SADALLREVE ELKSLMAARD GELEARRKEL KAKNKELEAN EKELEAGLML 60
61 IRAREDVICG LHAKIESLQQ ERDEAVAKAE RIDKELQEDR ARSQEFKEDT EFCLSTLRRE 120
121 KELAIMAKNK DLEAKEKELE ARLMLVHARE DKIHAKIERL QQERDEAVAK AERIDKELQE 180
181 DRSRSRVGNG SFAFSQEFYE DMDLDELEPL SPEFNEDMDS EELEPFQVIK KNMERSHKKF 240
241 IKDMECIKFI ASERARVL
|
| Detection Method: | |
| Confidence: | 37.045757 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
