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View Structure Prediction Details

Protein: gi|18415415, gi|...
Organism: Arabidopsis thaliana
Length: 237 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18415415, gi|....

Description E-value Query
Range
Subject
Range
gi|21554863 - gi|21554863|gb|AAM63712.1| unknown [Arabidopsis thaliana]
176.0 [0..1] [237..1]

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Predicted Domain #1
Region A:
Residues: [1-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLVGCVGKS SLVSMELRWA RRRKSDNAAS ALPRSIPIYI STLKKDINLE ELRNLYSLCN  60
   61 HSCNRLSEKD SNVEKIVDMK KLRRAISRSD VIVSVFCKPQ HVDVDDAVLY SEEESLSSSL 120
  121 YTSEFGRQNK DDSFLGDLFQ NAVPLTPSNG QLVGFGRAYS DYGLTASIHD LMVLPSLQRM 180
  181 GIGKLIVNRI VRLLTSRDIY DIAALCFEDE RPFFKACGFG DDRMGSTTMM FTKSLEA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.69897
Match: 1ozpA
Description: Crystal Structure of Rv0819 from Mycobacterium tuberculosis MshD-Mycothiol Synthase Acetyl-Coenzyme A Complex.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.44927632341056 bayes_pls_golite062009
transferase activity 1.29638283412179 bayes_pls_golite062009
transferase activity, transferring acyl groups 1.25574147031095 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 1.14025367092848 bayes_pls_golite062009
acyltransferase activity 1.11249291357784 bayes_pls_golite062009
N-acyltransferase activity 0.756613127653639 bayes_pls_golite062009
acetyltransferase activity 0.71069229070011 bayes_pls_golite062009
N-acetyltransferase activity 0.4223042426612 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle