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View Structure Prediction Details

Protein: MRS24_ARATH
Organism: Arabidopsis thaliana
Length: 436 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRS24_ARATH.

Description E-value Query
Range
Subject
Range
gi|7529740, gi|1... - gi|7529740|emb|CAB86925.1| putative protein [Arabidopsis thaliana], pir||T47779 hypothetical protein...
290.0 [0..17] [436..33]
gi|92889086 - gi|92889086|gb|ABE89684.1| Mg2+ transporter protein, CorA-like [Medicago truncatula]
250.0 [0..39] [436..33]
gi|221564892, gi... - gi|222055603|ref|YP_002537965.1| magnesium and cobalt transport protein CorA [Geobacter sp. FRC-32],...
243.0 [0..87] [434..10]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKGPLSFRR LSSIRHRKKG SAVKDDSAQT STPSSPPPPL PIHAGGSAVG ATGKAKKKTG  60
   61 GARLWMRFDR TGAMEVVEC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [80-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKSTIIKRAS VPARDLRILG PVFSHSSNIL AREKAIVVNL EVIKAIVTAE EVLLLDPLRP  60
   61 EVLPFVERLK QQFPQRNGNE NALQASANVQ SPLDPEAAEG LQSELPFEFQ VLEIALEVVC 120
  121 SFVDKSVAAL ETEAWPVLDE LTKNVSTENL EYVRSLKSNL TRLLARVQKV RDELEHLLDD 180
  181 NEDMADLYLT RKWIQNQQTE AILAGTASNS IALPAHNTSN LHRLTSNRSA SMVTSNTEED 240
  241 DVEDLEMLLE AYFMQLDGMR NKILTVREYI DDTEDYVNIQ LDNQRNELIQ LQLTLTIASF 300
  301 AIAAETLLAS LFGMNIPCPL YSIHGVFGYF VWSVTALCIV LFMVTLGYAR WKKLLGS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.045757
Match: 2bbjA
Description: Crystal structure of the CorA Mg2+ transporter
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle