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View Structure Prediction Details

Protein: gi|15223628, gi|...
Organism: Arabidopsis thaliana
Length: 479 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15223628, gi|....

Description E-value Query
Range
Subject
Range
gi|25518304, gi|... - pir||A86330 hypothetical protein F6F9.24 - Arabidopsis thaliana, gi|10086496|gb|AAG12556.1|AC007797...
275.0 [0..1] [479..1]

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Predicted Domain #1
Region A:
Residues: [1-479]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKPSTSMWA TLQKKRWPLM ILLVLSVSTV GMILVRSTFD SCSVSGKRCS REKEDNSDIK  60
   61 IQSVSGSLNP LEFMKSKLVL LVSHELSLSG GPLLLMELAF LLRGVESEVV WITNQKPVEE 120
  121 DEVIKVLEHK MLDRGVQVIS AKSQKAIDTA LKSDLVVLNT AVAGKWLDAV LKDNVPKVLP 180
  181 KVLWWIHEMR GHYFKPDLVK HLPFVAGAMI DSHATAEYWK NRTHDRLGIK MPKTYVVHLG 240
  241 NSKELMEVAE DSFAKNVLRE QVRESLGVRN EDILFGIINS VSRGKGQDLF LRAFHESLKV 300
  301 IKETKKLEVP TMHAVVVGSD MSAQTKFETE LRNFVQEMKL QKIVHFVNKT MKVAPYLAAI 360
  361 DVLVQNSQAR GECFGRITIE AMAFKLPVLG TAAGGTMEIV VNRTTGLLHN TGKDGVLPLA 420
  421 KNIVKLATNV KMRNTMGKKG YERVKEMFLE HHMSHRIASV LREVLQHAKI HSRTTNSDH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.69897
Match: 1rzuA
Description: Crystal structure of the glycogen synthase from A. tumefaciens in complex with ADP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.12142599404571 bayes_pls_golite062009
transferase activity 1.04894606863363 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 0.929172049566779 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 0.18186445930239 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle