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View Structure Prediction Details

Protein: FTSHC_ARATH
Organism: Arabidopsis thaliana
Length: 1008 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for FTSHC_ARATH.

Predicted Domain #1
Region A:
Residues: [1-740]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIAISYKPN PLISSSTQLL KRSKSFGLVR FPAKYGLGAT RKKQLFRVYA SESSSGSSSN  60
   61 SDGGFSWVRL AQSIRLGAER IGEKIGESVK TEIGFDSEEA SGRVNEYVAR VKDSVHKGHH 120
  121 ELTRFKNETV PSFIDWNKWE HWKDIRNWDG KRVAALFIYA FALLLSCQRV YVAIQAPRVE 180
  181 RERRELTESF MEALIPEPSP GNIEKFKRNM WRKATPKGLK LKRFIEAPDG TLVHDSSYVG 240
  241 ENAWDDDLET TEGSLKKIIG RNARIQTEAK KKLSQDLGVS GEIGDSVGNW RERLATWKEM 300
  301 LEREKLSEQL NSSAAKYVVE FDMKEVEKSL REDVIGRTSE TEGTRALWIS KRWWRYRPKL 360
  361 PYTYFLQKLD SSEVAAVVFT EDLKRLYVTM KEGFPLEYIV DIPLDPYLFE TICNAGVEVD 420
  421 LLQKRQIHYF MKVFIALLPG ILILWFIRES AMLLLITSKR FLYKKYNQLF DMAYAENFIL 480
  481 PVGDVSETKS MYKEVVLGGD VWDLLDELMI YMGNPMQYYE KDVAFVRGVL LSGPPGTGKT 540
  541 LFARTLAKES GLPFVFASGA EFTDSEKSGA AKINEMFSIA RRNAPAFVFV DEIDAIAGRH 600
  601 ARKDPRRRAT FEALIAQLDG EKEKTGIDRF SLRQAVIFIC ATNRPDELDL EFVRSGRIDR 660
  661 RLYIGLPDAK QRVQIFGVHS AGKNLAEDID FGKLVFRTVG FSGADIRNLV NEAAIMSVRK 720
  721 GRSYIYQQDI VDVLDKQLLE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.0
Match: 1ksfX
Description: N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone; ClpA, an Hsp100 chaperone, AAA+ modules
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [741-783]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GMGVLLTEEE QQKCEQSVSY EKKRLLAVHE AGHIVLAHLF PRF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 109.0
Match: 3cf1A
Description: No description for 3cf1A was found.

Predicted Domain #3
Region A:
Residues: [784-1008]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DWHAFSQLLP GGKETAVSVF YPREDMVDQG YTTFGYMKMQ MVVAHGGRCA ERVVFGDNVT  60
   61 DGGKDDLEKI TKIAREMVIS PQSARLGLTQ LVKKIGMVDL PDNPDGELIK YRWDHPHVMP 120
  121 AEMSVEVSEL FTRELTRYIE ETEELAMNAL RANRHILDLI TRELLEKSRI TGLEVEEKMK 180
  181 DLSPLMFEDF VKPFQINPDD EELLPHKDRV SYQPVDLRAA PLHRS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 114.0
Match: 2dhrA
Description: No description for 2dhrA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle