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View Structure Prediction Details

Protein: Grip128-PC
Organism: Drosophila melanogaster
Length: 501 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Grip128-PC.

Description E-value Query
Range
Subject
Range
TUBGCP3 - tubulin, gamma complex associated protein 3
gi|168270898 - gi|168270898|dbj|BAG10242.1| gamma-tubulin complex component 3 [synthetic construct]
404.0 [0..37] [499..391]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGMEDDLLLV EIFNKLQSCP LYQLLLEHAL ESGETQDLLC SVNTLSEMLT SNNEIQLPSL  60
   61 HDELFTQFFA QLKVYCGADN TDYEDEPE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [89-279]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDKDYEDLTV CNRQGIRNHE LFAIFTQPLV EQRLERQRER LKSNPVLMAN ILKRLERSTC  60
   61 LQLKSELPEA LREILRRRQW LANEYAIRAY CKETQVAEKM RFLRHTMLLE KYYLFVPYYN 120
  121 ALFVRMEKNN SWALGSVLTS KLCAVLLPHY PQLAHYLHVK LISQINSNSI KVYEALEAIE 180
  181 LDFERPMAMH Q

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [280-501]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WYILTPAHMQ DYNSVWRLML KVKWAVWKLE NMQFLRRARF NPCAPLDLIG LTIRRLEIVR  60
   61 FWLIFLINNL HAHIMEAVSR QFELRIGECK NVRELRIMHD EHLAWLKTHC MLTDEFKAFR 120
  121 VALDQIFHLV YVLDMEWTTC ASCMHDHDAL CLDVTISDDG IDDSETQRRS LEYLALNQVA 180
  181 EIELTYIRCH QMLADILNTL VHQNDHGFLS ALEETINSSV PH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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