YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SUVR1_ARATH
Organism: Arabidopsis thaliana
Length: 630 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUVR1_ARATH.

Description E-value Query
Range
Subject
Range
SUVR1_ARATH - Probable inactive histone-lysine N-methyltransferase SUVR1 OS=Arabidopsis thaliana GN=SUVR1 PE=1 SV=...
421.0 [0..29] [630..133]
gi|92894029 - gi|92894029|gb|ABE92042.1| SET-related region; Pre-SET; Histone H3-K9 methyltransferase [Medicago tr...
294.0 [0..7] [627..88]
gi|26346681 - gi|26346681|dbj|BAC36989.1| unnamed protein product [Mus musculus]
256.0 [0..186] [627..217]
gi|60098965, gi|... - gi|60302716|ref|NP_001012550.1| euchromatic histone-lysine N-methyltransferase 1 [Gallus gallus], gi...
255.0 [0..176] [630..840]

Back

Predicted Domain #1
Region A:
Residues: [1-193]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEDEFPLKR RLRSRRGRAS SSSSSSSSYN NEDLKTQPEE EDEDDGVTEL PPLKRYVRRN  60
   61 GERGLAMTVY NNASPSSSSR LSMEPEEVPP MVLLPAHPME TKVSEASALV ILNDEPNIDH 120
  121 KPVISDTGNC SAPMLEMGKS NIHVQEWDWE TKDILNDTTA MDVSPSSAIG ESSEHKVAAA 180
  181 SVELASSTSG EAK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [194-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ICLSFAPATG ETTNLHLPSM EDLRRAMEEK CLKSYKIVHP EFSVLGFMKD MCSCYIDLAK  60
   61 NS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [256-630]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSQLLETETV CDMSKAGDES GAVGISMPLV VVPECEISGD GWKAISNMKD ITAGEENVEI  60
   61 PWVNEINEKV PSRFRYMPHS FVFQDAPVIF SLSSFSDEQS CSTSCIEDCL ASEMSCNCAI 120
  121 GVDNGFAYTL DGLLKEEFLE ARISEARDQR KQVLRFCEEC PLERAKKVEI LEPCKGHLKR 180
  181 GAIKECWFKC GCTKRCGNRV VQRGMHNKLQ VFFTPNGKGW GLRTLEKLPK GAFICEYIGE 240
  241 ILTIPELYQR SFEDKPTLPV ILDAHWGSEE RLEGDKALCL DGMFYGNISR FLNHRCLDAN 300
  301 LIEIPVQVET PDQHYYHLAF FTTRDIEAME ELAWDYGIDF NDNDSLMKPF DCLCGSRFCR 360
  361 NKKRSTKTMQ ILNKA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.045757
Match: 2o8jA
Description: No description for 2o8jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle