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View Structure Prediction Details

Protein: IRE1B_ARATH
Organism: Arabidopsis thaliana
Length: 881 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for IRE1B_ARATH.

Predicted Domain #1
Region A:
Residues: [1-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGSALLDLI LFLLVSPLAH SFKGSEISKF YDKSISNQIS QSDRESGYVL VSTVDGSISL  60
   61 VDMSSQKLDW TFHTNEPIYS SYQAPHYHYT TDEERSSVLG DDFYMDCDKD WRLYNSSVRK 120
  121 GKRVNEIVDA SEFIGTLPYT STDRIVLGKK DTSVFLLDWK TGKLVKRYRM DELYSNTVVE 180
  181 NDKEKAIVLS KEAPLLFGSG FKKSEDFPEL VYIERKDFKI QCISKFGDVL WSVSYAKMEA 240
  241 KLQNHESVQF ISGLSSSVGK NQFPLSYTTS VPMVQLRNVK YETLFPRLGF LDEALYLPFQ 300
  301 DRKPNQLAIG DGNQLTLPGN KEAEEVLSLP LPE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.154902
Match: 1ry7B
Description: Crystal Structure of the 3 Ig form of FGFR3c in complex with FGF1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [334-762]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TVISQITDII DGSTKQAGFA SKFSGLIVLI FGFCVTMLSV CGLFFYRLRQ SIRIKEPYVS  60
   61 EVPIATPKKK KSKKNGTTKA VHKKENGFIS GGNKDPSHEE NEKRLLTAFP GLNNSSAEGY 120
  121 RVGKLFVSNK EIAKGSNGTV VLEGSYEGRL VAVKRLVQSH HDVAQKEILN LMASDKHSNI 180
  181 VRWYGVDQDE HFIYISLELC ACSLNDLIYA SSALLESPMA SSSIHSIQIN PIFENGKGVE 240
  241 LWKENGHPSP VLLKLMRDIV AGLVHLHDIG IVHRDLKPQN VLIVKNSSLC AKLSDMGISK 300
  301 RLPADTSALT RNSTGLGSGS SGWQAPEQLR NERQTRAVDL FSLGCVLFFC MTGGKHPYGD 360
  361 NYERDVNVLN DQKDLFLIES LPEAVHLLTG LLNPDPNLRP RAQDVMHHPL FWNSDMRLSF 420
  421 LRDASDRVE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.0
Match: 2fo0A
Description: No description for 2fo0A was found.

Predicted Domain #3
Region A:
Residues: [763-881]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LENREEGSQL LAALESTAAV TLNGRWDEKL DSIFLDNIGR YRRYKFDSIR DLLRVIRNKL  60
   61 NHYRELPKEL QELLGSVPEG FERYFSSRFP KLLIQVYTVL FDYCNNEEFF FKYSKTTVF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.69897
Match: 2rioA
Description: No description for 2rioA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle