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View Structure Prediction Details

Protein: GPT1_ARATH
Organism: Arabidopsis thaliana
Length: 388 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPT1_ARATH.

Description E-value Query
Range
Subject
Range
gi|21554690 - gi|21554690|gb|AAM63660.1| glucose-6-phosphate/phosphate translocator [Arabidopsis thaliana]
192.0 [0..1] [388..1]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLSVKQTLS PKIGLFRRNP SSSLGRSPVS LSFPSTELPK RTVLAVSKPL HLSSSLRAKS  60
   61 PVVRCEAYEA DRSEPHPIGD DAAAAETK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [89-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEAAKKLKIG IYFATWWALN VVFNIYNKKV LNAYPYPWLT STLSLAAGSL MMLISWAVGI  60
   61 VETPKTDFDF WKTLFPVAVA HTIGHVAATV SMSKVAVSFT HIIKSGEPAF SVLVSRFILG 120
  121 ETFPTSVYLS LIPIIGGCAL SALTEL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.12
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [235-388]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NFNMIGFMGA MISNLAFVFR NIFSKKGMKG KSVSGMNYYA CLSMLSLLIL TPFAIAVEGP  60
   61 QMWVDGWQTA LATVGPQFVW WVVAQSVFYH LYNQVSYMSL DQISPLTFSV GNTMKRISVI 120
  121 VSSIIIFRTP VQPVNALGAA IAILGTFLYS QAKL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle