YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SYP_PSEA8
Organism: Pseudomonas aeruginosa LESB58
Length: 571 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYP_PSEA8.

Description E-value Query
Range		 Subject
Range
SYP_PSEAB - Proline--tRNA ligase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=proS PE=3 SV=1
 0.0 [1..571] [1..571]
SYP_PSEA7 - Proline--tRNA ligase OS=Pseudomonas aeruginosa (strain PA7) GN=proS PE=3 SV=1
 0.0 [1..571] [1..571]
gi|67158823, gi|... - gi|67158823|ref|ZP_00419641.1| Prolyl-tRNA synthetase, bacterial [Azotobacter vinelandii AvOP], gi|6...
gi|67158823 - gi|67158823|ref|ZP_00419641.1| Prolyl-tRNA synthetase, bacterial [Azotobacter vinelandii AvOP]
 0.0 [1..571] [17..587]
SYP_PSEE4 - Proline--tRNA ligase OS=Pseudomonas entomophila (strain L48) GN=proS PE=3 SV=1
gi|95112071 - gi|95112071|emb|CAK16798.1| prolyl-tRNA synthetase [Pseudomonas entomophila L48]
 0.0 [1..571] [1..571]
SYP_PSEF5 - Proline--tRNA ligase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=proS PE=3 SV=1
 0.0 [1..571] [1..571]
SYP_PSEP1 - Proline--tRNA ligase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=proS PE=3 SV=1
tr|I7CAD8|I7CAD8... - Proline--tRNA ligase OS=Pseudomonas putida (strain DOT-T1E) GN=proS PE=3 SV=1
 0.0 [1..571] [1..571]
SYP_PSEPF - Proline--tRNA ligase OS=Pseudomonas fluorescens (strain Pf0-1) GN=proS PE=3 SV=1
 0.0 [1..571] [1..571]
SYP_PSEPK - Proline--tRNA ligase OS=Pseudomonas putida (strain KT2440) GN=proS PE=3 SV=1
 0.0 [1..571] [1..571]
SYP_PSEU2 - Proline--tRNA ligase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=proS PE=3 SV=1
 0.0 [1..571] [1..571]
SYP_PSESM - Prolyl-tRNA synthetase OS=Pseudomonas syringae pv. tomato GN=proS PE=3 SV=1
SYP_PSESM - Proline--tRNA ligase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=proS PE=3 SV=1
 0.0 [1..571] [1..571]

Back

Predicted Domain #1
Region A:
Residues: [1-571] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTSQYLLST LKETPADAVV ISHQLLLRAG MIRRLASGLY TWLPMGLRVL RKVETIVREE  60
   61 MNAAGALEVL MPAVQPAELW QESGRWEQYG PELLRLKDRH EREFCVGPTH EEVITDLARN 120
  121 ELNSYKQLPI NFYQIQTKFR DEIRPRFGLM RGREFIMKDA YSFHLSQDSL QQTYDGMYQA 180
  181 YSKIFSRLGL DFRPVQADNG SIGGSGSHEF HVLANSGEDD IVFSDSSDYA ANIEKAEAVP 240
  241 RESARGSATE DMRLVDTPNT KTIAALVDGF QLPIEKTIKT LVVHGAEEGT LVALIVRGDH 300
  301 ELNEIKAANQ PLVASPLVFA SEAEIRAAIG AGPGSLGPVN LPIACIVDRS VALMSDFAAG 360
  361 ANIEDKHYFG VNWERDLPLP EVADLRNVVE GDPSPDGKGT LVIKRGIEVG HIFQLGTKYS 420
  421 EAMKLSVLSE QGKPVNLIMG CYGIGVSRVV AAAIEQNHDE RGILWPSALA PFQIALVPLK 480
  481 YETESVKQAT DKLYAELTAA GFEVLLDDRD KKTSPGVKFA DMELIGIPHR IVISDRGLSE 540
  541 GVLEYKGRRD SESQNLPIGE LMSFITEKLS R

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 121.0
Match: 2j3lA
Description: No description for 2j3lA was found.
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle