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View Structure Prediction Details

Protein: gi|221235715, gi...
Organism: Caulobacter crescentus NA1000
Length: 483 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221235715, gi....

Description E-value Query
Range
Subject
Range
gi|78514708, gi|... - gi|78697395|ref|ZP_00861902.1| conserved hypothetical protein [Bradyrhizobium sp. BTAi1], gi|7851470...
289.0 [0..30] [407..1]

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Predicted Domain #1
Region A:
Residues: [1-221]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLHRRRAL PRGMRCGFTS DLNLLAEDSM KRLVFCFDGT WNRLSADTPT NVVLLAASIQ  60
   61 RASPKGVTQV IHYDEGVGTG RLEKLSGGMF GQGLVQNIRE AYRFLIFNYE VGDEIYAFGF 120
  121 SRGAFSARVF LGFIRHAGIL SRKHAARIDE AMAHYRQRLS GLDPEGQKVM RFRAEYARNI 180
  181 CVDLAEDAWR TANIAGYVQG SSPLLQIKYL GVWDTVGAMG L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [222-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAVLPGSKWL NRKHEFLDTT LTDMVLSARH AVALDERRKL FPITLWDNID ALNRTRQFDS  60
   61 EDPKAPYQQK WFPGTHGGVG GGGDIRGLSD GALAWIVQGA KAAGLEMDIG PDSRMGGLFP 120
  121 DWTQSIDNMS KPKKSLMSAL AADRAGPTAL WEVSPSARRR WRAPAAALGE GLYRPGSLAK 180
  181 LTDALQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [408-483]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEADESPDLL PPQGAEFREH TVVAGDTLSK IARREYGDAA LYTRIFAANR DKIDDPDEIF  60
   61 VGQVIRIPPP LPKDAA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.36
Match: 2djpA
Description: No description for 2djpA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle