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View Structure Prediction Details

Protein: gi|218197843
Organism: Oryza sativa Indica Group
Length: 637 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218197843.

Description E-value Query
Range
Subject
Range
B3GTF_ARATH - Beta-1,3-galactosyltransferase GALT1 OS=Arabidopsis thaliana GN=GALT1 PE=1 SV=1
490.0 [0..1] [637..1]

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Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKWHGGFVI VSLFIILMLR YVILDSPLAE KSLQYVFQQN NTTPLHWLDV PNPPAVQNPQ  60
   61 NISQVISTEL LASNLSITRN FSDRELQSLH SWNHLKDLVS HAHILPDGVE AIKEAGVAWR 120
  121 ELNAALEYDE SAVSVNGSTH QKSKEKQCPY 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [151-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SIRRMNATRS GDRFVLKIPC GLIQGSSITI IGTPGGLLGS FKIELTGATV PGEPDPPIVL  60
   61 HYNVRLLGDK LTEDPVIVQN TWTIADDWGS EDRCPSPGSD AKDIAKVDEL EKCGSMVGND 120
  121 QKQAWATKLK SNVSSIQPAW KKNTEPKKYF PFRQGYLAIA ILRVGAHGIH MTVDGKHVTS 180
  181 FAFREDLEPG FVGEVRIAGD IKLLSVIA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.522879
Match: 2d6kA
Description: No description for 2d6kA was found.

Predicted Domain #3
Region A:
Residues: [359-637]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGLPTTEDFE HVTDLEILKA PPVPMDKPLD LFIGIFSTAN NFKRRMAVRR TWMQYDAVRS  60
   61 GKAAVRFFVG LHKNEVVNEE LWNEARTYGD IQLMPFVDYY SLILWKTIAI CIYGTNVLSA 120
  121 KYVMKTDDDA FVRVDEILLS LDRVNISHGL LYGRVNSDSQ PHRDPYSKWY ITPEEWPEES 180
  181 YPPWAHGPGY IVSQDIAKEV YRKHKRGELK MFKLEDVAMG IWINEMKKDG LDVKYENDGR 240
  241 ILVEGCEEGY VVAHYQEPRD MMCLWDKFLK TKRGTCCKE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.39794
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle